Gene BamMC406_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0253 
Symbol 
ID6179014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp292110 
End bp292925 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content71% 
IMG OID641679989 
Producthypothetical protein 
Protein accessionYP_001806970 
Protein GI172059318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00334487 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTACCA TTCACGTGAT TCAGGGCGGC ACCGCCGCCG CGTCGTTGCG CGAGGCGCTC 
GCGCAAGCCG GACGCGACGA GCGCGTCGTC GGGTTGCTCG ACGATCTCGC GGTCGGGCCG
CTGAAGGGCG CCGACGAGAC GCCCGACACG CGCGCCGCCT TCTGGCAGCG CGTGCTCGGC
GATCAGATTC CCGACTGGAA TGCGGAAATC CAGGGCGAGT TCGCCCGCCT CGACCAGCTC
GCGATGGACA CGGGGCAGGT GGTGGTCTGG CACGCGCCGA GCGTCGGCGA CAAACTGCTG
CTGCGCCGCG TCGCCTATCA CCTGCGCAAC GTGCCGCAGC GCCTGAACGA GGTGCGGTTG
TCGGCCGCCG ACCTCGACGC ACCGCAGCGC GCAGCGCTGA CCCGCACCGA CCAGGCTTGT
TCGACCGGGA TGTTCTCGCC GGCGGCGCTC GCGCGCAAAC GGCCGATGGC CGCGCCCGTC
TCGGTGCTGC GCATCGGCCG CCTCGCGCTC GAATGGCAGG AAGCCAAGCA CCTGAATGCC
GAGTTGCGCT ACTGGGTGAG CAACACGATC AAGAGCGGCC AGTACACCGA CCTCGACGCG
CTGATCGCAG CGCACACGGA AACCGGCTGG CAACCCGCAC GGCGCGTGGT CGGCGGCATC
ATGGCCGGCG CCGACCGCGG CGGGCTGTTC GTCAGCGACT CGATCGCCTG GTGGCGCTGC
CGCGAACTCG CGGCAGCCGG CCGGCTCGAG CTGCAGGACG ACGCGCCGGC CGCCCTCTCT
TTCACGCAGG TACGCGCGCC CGCCGCGCCC CGCTAA
 
Protein sequence
MSTIHVIQGG TAAASLREAL AQAGRDERVV GLLDDLAVGP LKGADETPDT RAAFWQRVLG 
DQIPDWNAEI QGEFARLDQL AMDTGQVVVW HAPSVGDKLL LRRVAYHLRN VPQRLNEVRL
SAADLDAPQR AALTRTDQAC STGMFSPAAL ARKRPMAAPV SVLRIGRLAL EWQEAKHLNA
ELRYWVSNTI KSGQYTDLDA LIAAHTETGW QPARRVVGGI MAGADRGGLF VSDSIAWWRC
RELAAAGRLE LQDDAPAALS FTQVRAPAAP R