Gene BamMC406_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0252 
Symbol 
ID6178092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand- 
Start bp291482 
End bp292087 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID641679988 
ProductTetR family transcriptional regulator 
Protein accessionYP_001806969 
Protein GI172059317 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00323074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGTA CCCGAGCGCC CGACCACGAA TCCCAGCGCG AGCAGATCCT CGATCTCGCT 
GCCGAGAAAT TCGCGCAAAC GAGCTATCCG AGCACGTCGA TGTCCGATCT CGCGACCGCG 
AGCGGCACGT CGAAGGCGCG GCTCTATCAC TATTACGAGA GCAAGGAAGC GATCCTGTTC 
GACCTGCTCG ACCGCTACAC GAAACGGTTG ATGCTGATCA TCGCCGAGGT CGAAGGCGCC 
AGCCAGCGGC GCGGCCTCAC CGAGCGCGAC GCGTTCGCCG AACTGGTGCG GGCGTTCCTC 
GCCGAGTACG AGACGTCGCA CAGCCGCCAC GTCGCGCTGC TCAACGACGT GAAGTATCTG 
GAGGATGCGC AGCGCGAAAT CGTGCTGGAT CGCCAGCGCG ACATCGTCGC GGCCTTCGCG 
CGCCAGCTCG CACGCGCCTA TCCGGACCGC ATCTCCAAGG AAAACCAGAC GTCGGTCACG 
ATGATGGTGT TCGGGATGAT CAACTGGACG TTCACGTGGC TCAAGCCCGG CGGCCGCCTC 
GGCTACCGCG ACTTCGCCGA ACAGGTGATC GACCTGATGG AGCGCGGGCT GTCGCCGGGC 
GCGTGA
 
Protein sequence
MARTRAPDHE SQREQILDLA AEKFAQTSYP STSMSDLATA SGTSKARLYH YYESKEAILF 
DLLDRYTKRL MLIIAEVEGA SQRRGLTERD AFAELVRAFL AEYETSHSRH VALLNDVKYL 
EDAQREIVLD RQRDIVAAFA RQLARAYPDR ISKENQTSVT MMVFGMINWT FTWLKPGGRL 
GYRDFAEQVI DLMERGLSPG A