| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0250 |
|---|
| Symbol | |
|---|
| ID | 6177664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 289828 |
|---|
| End bp | 290220 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641679986 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001806967 |
|---|
| Protein GI | 172059315 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3152] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00121654 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAATGA AAACCGCGCT GTACGCATGG CTGAACGGCT ATCGGCGCAT GCTGTCGTTT
CGTGGCCGGG AGCGACGCCG GGATTTCCTG TGCTTCCTGG TCGGCCATTA CCCGCTCTTT
TACCTTCTGG TCACGCTGAT CAAATGGTCA CAGAATCGGC TTTCCGCCGA CGCAACGCTA
ACGTCATTCC TGCTGTTCTG CGCCGGGCTC GCTTCGCTAT GCGCGACCCT GGCCTATAAC
GTCAGGCGCC TGCACGACAG CAATCGCTCC GGCCTGCTGT GCATCGGCTA CTTCCTGTTG
GCAGCCCCCA TTGTGATCCT CGTGTCGCTG TGGCTCGCGC CCCGCAACGC CGGTAACCGA
TACGGCCTCG ATCCGCGCCG CCCGCGCGCG TAG
|
|---|
| Protein sequence | MTMKTALYAW LNGYRRMLSF RGRERRRDFL CFLVGHYPLF YLLVTLIKWS QNRLSADATL
TSFLLFCAGL ASLCATLAYN VRRLHDSNRS GLLCIGYFLL AAPIVILVSL WLAPRNAGNR
YGLDPRRPRA
|
|---|
| |