| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0239 |
|---|
| Symbol | |
|---|
| ID | 6177476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 274146 |
|---|
| End bp | 275387 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641679975 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001806956 |
|---|
| Protein GI | 172059304 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000412577 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000983728 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCA ACCTCATTCT GGCGGCGGCC TTTGCCGCCC CCCTTCTTTC CGCCTGCGGC
GGCGGCAGCG ACAATCCGCC CCCGCTCGTC GAAGACCGGC TCTGCCCCGC GTCGCTCGAC
TACAACACCG TCTACACGGG CGGCGCCGGC AGCGGCGAAC TGGCCAAGGT GCAGCTCGAC
ACGACCAAGA TGACCTGGCA GGTCACCTAT GTCGAATCGC CGGTCCCGCG AACGACCGGC
ACCGTCACGC CGACCCGCGC GGGCACCGTC GACAGCGGCA CGCTCACGCA GGAAACGATG
CTGCCGACCA ACAAGCTGAA CCAGTGCGCG TTCCGCCTGA ACGGCGCGAG CCTCGATGCG
TCGCGTCCGG CGCGCATCTT CGTCGGCTTC GGCGTCGCGG GCGGCACGAT CCCCGGCAAG
GAAATCCAGT TCGGCGGCGT GCTCGGCCAG GCGGCCGTGC CCGACACGAA ATTCCCGTAC
TACCCGTTCA TCGGCTTCTC GTCGATCGAG ACCGACATCA CGAAGGTTGC TGGCACATAC
AGCCACGTCG GCTTCGGCGA AGTGCCGTCG CAGAACTTCG CGCCGGCGTC GATCGACGCG
AAGGTGACGA TCAACGCGGA CGGCACGTGG ACCAAGTGCG ATTCGACCGG CCAGTTCGCC
GGCGGCGCGT GCACGCAGCA GGGCACGAAC TTCGTGCAGT CGGCCGACGG CAGCGGCGCG
TTCCAGACGA ACAACTATGC GAGCCAGCTG AAGCCGACGC TGTCGGCGAC GCCGCAAGGC
AAGGGATTCA TGATCGTCGG CAAGCTGCGC AACCAGCTGG TGCCGATCCT CGTGCGCACC
GGTGTCGCGA ACCCGAACCC GACGCCCGAC AGCAACGGCG TGCCGGGCCT GACCGCCGAC
GACGAATCGA GCATCTCGAT CCTCGCGCCG CAGACGGCAA TCGCGGCCGG CTCGCAGAAC
GGCGAGTACA TCGGCGTCGA CAGCCGGTTC GACTACCGGA CCACCGCGCT GATCAACAAC
CAGGCCACGC TGCTGGATCC GTTCCAGCCG TCGCAGGCCT CGCTCGCGAC GCCGCTCGAC
CTGGACTACA CGCAGAAGGT GCCGGGCACG GTCACGACGA TCCATACGGG TTCGGGCAGC
ACGTCGCCGA CCGGCAAGTT CATCTTCACG GGTGGCGTGT TCGGTTTCCT CGACAACGCG
GGTTCGACGC CGTATTTCAC GATCGGCGCG TTCGTCCAGT AA
|
|---|
| Protein sequence | MKRNLILAAA FAAPLLSACG GGSDNPPPLV EDRLCPASLD YNTVYTGGAG SGELAKVQLD
TTKMTWQVTY VESPVPRTTG TVTPTRAGTV DSGTLTQETM LPTNKLNQCA FRLNGASLDA
SRPARIFVGF GVAGGTIPGK EIQFGGVLGQ AAVPDTKFPY YPFIGFSSIE TDITKVAGTY
SHVGFGEVPS QNFAPASIDA KVTINADGTW TKCDSTGQFA GGACTQQGTN FVQSADGSGA
FQTNNYASQL KPTLSATPQG KGFMIVGKLR NQLVPILVRT GVANPNPTPD SNGVPGLTAD
DESSISILAP QTAIAAGSQN GEYIGVDSRF DYRTTALINN QATLLDPFQP SQASLATPLD
LDYTQKVPGT VTTIHTGSGS TSPTGKFIFT GGVFGFLDNA GSTPYFTIGA FVQ
|
|---|
| |