| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0227 |
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| Symbol | |
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| ID | 6177867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 261979 |
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| End bp | 263316 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641679963 |
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| Product | carotenoid oxygenase |
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| Protein accession | YP_001806944 |
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| Protein GI | 172059292 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000205038 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGTAT TCGACCTGAA CCGGGGTGCG ATCGCGCCGG TCGCCGACGA AGTCGACGTC
GTCGGGCTGC GCGTGATCGG CACGATCCCG CCCGAACTCG ACGGCACGCT GCTGCGCAAC
GGCCCGAATC CGCCGGGCGG TCGCTTCGAC GGGAACGACG TACTGTCGTG GTGGCCGGAA
GCGGCGATGC TGCACGCGAT CGCATTCGAA AACGGCCGCG CGGCCGGCTA CCGAAACCGC
TGGGCGCGCA CGCGGCGCTG GGCCGCCGTG CATGCACCCG CGCAGGCGCC GCACCTGCCC
GACACCAATC CGAACGTGAA CATCCTGCAG CACGCGGGCG AATTGCTGGC GCTGGCCGAA
GGCGGCGCGC CGCTCGCGAT CACGGCCGCG CTCGACACGC TCGGCGCACC CGCGCGGCAC
GCGGCGCTCG ACGGCGCGAT GACCGCGCAT CCGAAGGTCG ATCCGGTGAC GGGCGAGCTG
ATCCTGTTTC GCGCGGACTG GCGCGAACCG TGGCTGCGCT ATGGCGTCGC GGACGCGCAC
GGCGTGCAGC GTGTCGACCT CGCCGTCGAC GTGCGCGCGC CGTCGATGAT GCACGACCTC
GCGATCACCG AAACCCGCAG CCTGCTGCTC GACCTGAATG TCGGCTACGA CTTCGCGATG
CTGAAGCAGG GGCACCGGAT GCCGCTGCGC TGGCACGACG ACCGCGACGC ACGGATCGGC
GTGATCCCGC GCCACGGCGG TGACGTGCGC TGGTTCGGCA TCGAGCCGTG CTTCATCCAG
CACGTCGTGA ACGCGTACGA CTGCGACGCG TCGTGCATCG TGCTCGATGT GGTTCGCTAT
CCATGGTTCC TGCGGCTCGA CGCGCGTGCC GGCCGCTTTG CCGACAACCC GCTCGGCGAG
CTGTGGCGCT ACGTGATCGA TACCGCGAAC GGGCTGGTCG ACGAAGGGCC GCTCGCCGAC
GGCGGCATCG AGCTGCCGCG CATCAACGAA AGCAGGACGG GGCGCTGCTA CCGCTATCTG
TATGCGGTCG AGCAGCCGAA CAACGCGGAA ATGCGCGGCG TGATGCGCTT CGACCACGTG
CGCGGCACGA CGACGCGTTA CGCGGTGCCG GCCGGCGACC AGAACGGCGA GCCGGTGTTC
GTGCCGCGCC CGGGCGGCAC CGACGAAGAC GACGGCTGGC TGCTGGTGGT GGTCTACCGT
GCGGCGACGG ATACGAGTGA CGTCGTGATT CTCGATGCCC GCGCGATCGA TGCGGCGCCG
GTCGCGACGG TGCACCTGCC GCGTCGCGTG CCCGCCGGCT TCCACGGCGC ATGGGTGCCG
CGCGAGCGCC TGGCGTAA
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| Protein sequence | MTVFDLNRGA IAPVADEVDV VGLRVIGTIP PELDGTLLRN GPNPPGGRFD GNDVLSWWPE
AAMLHAIAFE NGRAAGYRNR WARTRRWAAV HAPAQAPHLP DTNPNVNILQ HAGELLALAE
GGAPLAITAA LDTLGAPARH AALDGAMTAH PKVDPVTGEL ILFRADWREP WLRYGVADAH
GVQRVDLAVD VRAPSMMHDL AITETRSLLL DLNVGYDFAM LKQGHRMPLR WHDDRDARIG
VIPRHGGDVR WFGIEPCFIQ HVVNAYDCDA SCIVLDVVRY PWFLRLDARA GRFADNPLGE
LWRYVIDTAN GLVDEGPLAD GGIELPRINE SRTGRCYRYL YAVEQPNNAE MRGVMRFDHV
RGTTTRYAVP AGDQNGEPVF VPRPGGTDED DGWLLVVVYR AATDTSDVVI LDARAIDAAP
VATVHLPRRV PAGFHGAWVP RERLA
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