Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0225 |
Symbol | |
ID | 6177945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 259696 |
End bp | 261036 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641679961 |
Product | d-galactonate transporter |
Protein accession | YP_001806942 |
Protein GI | 172059290 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000305819 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATCCGC TTCACGCATT GCCGGCATCC GTGTCGGCAA CGGCCCGGCG CACCCGCGTC CGCTGGCTCG TGCTGACCGT GCTGTTCGCG GTCACGACGA TCAACTATGC GGATCGCGCG GCGATCGCGA TCGCCGGCCC GGCGCTCGCC CGCGCGATGC ACCTGAGCCA CGTGCAGATG GGCTTCATCT TCTCGGCGTT CGGCTGGTCG TACGTGATCG CGCAACTGCC GGGCGGCTGG CTGCTCGATC GCTTCGGGTC GCGCGTCGTC TATGCGTTCA GCATCTTCTT CTGGTCGCTG TTCACGCTGC TGCAGGGCGG CATCGGCTTC TTCAGCGGTG CGGCCGCGTT CGCGCTGCTG TTCGGGTTGC GCTTCCTGGT CGGCGCGGCC GAGGCGCCGT CGTTCCCGGC CAACAGCCGG ATCGTGTCCA CCTGGTTCCC GGCCGCGGAA CGCGGCACCG CATCGGCGAT CTTCAACGCC GCGCAGTACG CGGCGACCGT CGTGTTCGCG CCGCTGATGG GCTGGCTCGT GCACGCGTTC GGCTGGCAGT CGGTGTTCGC GGTGATGGGC GTGCTCGGCT TCGCGTTCGT GCTGGTGTGG AACCGCACGA TGTACGACCC GAAGGCGCAT CCGCGCGTCA ACGATGCGGA GCTCGACTAC CTCGCCGAAG GCGGTGCGCT CGTCAACATC GACCAGGCGA CCGGCGCGCG CGACGGCGGC CCGTCGATGC GTCACGTGAA GGCGCTGCTC AGGAACCGGA TGCTCGTCGG CGTGTACGTC GCGCAGTACT GCATCAACGC GCTCACCTAC TTCTTCATCA CGTGGTTTCC CGTCTATCTC GTGCAGGCGC GCGGGATGTC GATCCTCAAC GCGGGCCTGG TCGCGTCGAT CCCGGCCGTG TGCGGGTTTC TCGGCGGGAT TCTCGGCGGC ATCGTGTCCG ACGGGCTGCT CAAGCAGGGC CGGTCGCTGT CGGTCGCGCG CAAGGTGCCG ATCGTGATCG GCATGCTGCT GTCGATGTCG ATGATCGTCT GCAACTACAC CGACTCGCAC GTGCTCGTCG TGCTGTTCAT GGCGCTGTCG TTCTTCGGCA AGGGCCTCGG CGCGCTCGGC TGGGCCGTCA ACGCCGACAC CGCGCCGCGC CAGATCGCCG GCCTGAGCGG CGCGCTGCTC AATACCTGCG GCAATCTTTC CAGCATCACG ACGCCGATCG CGATCGGCTA TATCGTCGAC CGCAGCGGCT CGTTCAACGG CGCGCTGGTG TATGTCGTCG CGCACGCGCT CGTCGCCGTG ATCTGCTATT TGTTCGTCGT CGGCGAAATT CGCCGCGTCG AACTGAACTG A
|
Protein sequence | MNPLHALPAS VSATARRTRV RWLVLTVLFA VTTINYADRA AIAIAGPALA RAMHLSHVQM GFIFSAFGWS YVIAQLPGGW LLDRFGSRVV YAFSIFFWSL FTLLQGGIGF FSGAAAFALL FGLRFLVGAA EAPSFPANSR IVSTWFPAAE RGTASAIFNA AQYAATVVFA PLMGWLVHAF GWQSVFAVMG VLGFAFVLVW NRTMYDPKAH PRVNDAELDY LAEGGALVNI DQATGARDGG PSMRHVKALL RNRMLVGVYV AQYCINALTY FFITWFPVYL VQARGMSILN AGLVASIPAV CGFLGGILGG IVSDGLLKQG RSLSVARKVP IVIGMLLSMS MIVCNYTDSH VLVVLFMALS FFGKGLGALG WAVNADTAPR QIAGLSGALL NTCGNLSSIT TPIAIGYIVD RSGSFNGALV YVVAHALVAV ICYLFVVGEI RRVELN
|
| |