Gene BamMC406_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0214 
Symbol 
ID6178453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp250675 
End bp251286 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID641679949 
Productrare lipoprotein A 
Protein accessionYP_001806931 
Protein GI172059279 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.104099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAC GTTTTCCGAC TCGATTCGGG ACCATTGCAT TATTTTTCGC GCTGACGGGC 
TGTGCGGTGC CATCCAGCCA GACGACCAGC AGCATCAACC AGAAGAGCGC GGTCAGCAAG 
ACGGCCGCGG CCGCCAAGGC GGACGACGAC AAGCAGCAAC TGAGTTTCGA TTCCGCGCTG 
GCATCGATGC CGGCTGCCGA CAGCAAGGAC GCGAAGAAGT CGTCGCTGGC GGACGCCGAG 
CCGATCGACG GCAAGGACGT GTCCGACTTC CGCCAGACGG GCCGGGCATC GTGGTATGGC 
CGCGATTTCC ACGGCCGCCG TACCGCGAAC GGCGAGCGCT TCAACATGAA CGCGCTGACC 
GCCGCGCACC GCACGCTGCC GCTGTCCTCG TACATCAAGG TGACGAACGC GTCGACCGGC 
AAGTGGGTCG TCGTGAAGGT CAACGATCGC GGGCCGTACA AGCGCGGCCG CGTGCTCGAC 
CTGTCGTATG CGGCTGCCAG GATGATCGGC CTCGTGCACT CCGGCACGGG TCGCGTGAAG 
ATCGAAGGGC TGTCGCCGCA GGAAGCACGC GAGGCACGCG ACGAAATGCT CGCGTCGCTA 
TCGTCGAAGT AA
 
Protein sequence
MNLRFPTRFG TIALFFALTG CAVPSSQTTS SINQKSAVSK TAAAAKADDD KQQLSFDSAL 
ASMPAADSKD AKKSSLADAE PIDGKDVSDF RQTGRASWYG RDFHGRRTAN GERFNMNALT 
AAHRTLPLSS YIKVTNASTG KWVVVKVNDR GPYKRGRVLD LSYAAARMIG LVHSGTGRVK 
IEGLSPQEAR EARDEMLASL SSK