| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0213 |
|---|
| Symbol | |
|---|
| ID | 6176369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 249372 |
|---|
| End bp | 250016 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641679948 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001806930 |
|---|
| Protein GI | 172059278 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.325973 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCA CGCTCATTCC GGTCACGCCG TTCCAGCAGA ACTGCTCGCT GGTCGTCTGC
GAAAAGACCG GCCGCGCCGC CGTCGTCGAT CCGGGCGGCG ATCTCGAACG GATCGAAGAG
GAGATCGCGC GGCAGAACGT GCAGCTCGAG AAGGTGCTGC TCACGCACGG CCACATCGAT
CACTGCGGTG GCGCCAAGGC GCTCGCGACG CACTACGGCG TGCCGATCGT CGGGCCGCAG
GAAGACGAGC GCTTCTGGAT CGAGCAACTG CCGATGCAGA GCCAGCGCTT CGGCTTCCCG
GCCGCCGAGA CGTTCGAGCC GGACCACTGG CTGAACGACG GCGACACCGT GCAGGTCGGC
GACGAGACGC TCGAGGTCTA TCACTGCCCG GGCCACACGC CCGGCCACGT CGTGTTCTTC
AGCCGCGCGC ATCGCGTCGC GATCGTCGGC GACGTGCTGT TCGCCGGCTC GATCGGCCGC
ACCGATTTCC CGCGCGGCAA CCATGCGGAC CTCGTGCGCT CGATCAAGGA GAAGCTGTGG
CCGCTCGGCG ACGACGTCAC GTTCGTGCCA GGCCACGGCC CGGTGTCGAC CTTCGGCGAC
GAGCGCCGCA CGAATCCGTT CGTGTCCGAC AAGGTGTTCG GATGA
|
|---|
| Protein sequence | MKVTLIPVTP FQQNCSLVVC EKTGRAAVVD PGGDLERIEE EIARQNVQLE KVLLTHGHID
HCGGAKALAT HYGVPIVGPQ EDERFWIEQL PMQSQRFGFP AAETFEPDHW LNDGDTVQVG
DETLEVYHCP GHTPGHVVFF SRAHRVAIVG DVLFAGSIGR TDFPRGNHAD LVRSIKEKLW
PLGDDVTFVP GHGPVSTFGD ERRTNPFVSD KVFG
|
|---|
| |