Gene BamMC406_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0203 
Symbol 
ID6177918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp240172 
End bp240864 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content70% 
IMG OID641679938 
Productcarboxymethylenebutenolidase 
Protein accessionYP_001806920 
Protein GI172059268 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.19899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCCC AATGGATCGA CATCCCGACC GGTAACGACA GCTTCGGCGG CTATCTCGCG 
CTGCCCAAGC GCGGCAAGGG CCCCGCCGTC ATCATCATCC AGGAGATCTT CGGCGTGAAC
GCGCACATCC GCGCGGTCGC CGACCAGTAC GCGGCCGACG GCTTCGTCGC GCTCGCGCCG
GACGTGTTCT GGCGCACGCA GCCGCGCGTC GAGCTGACCT ACGAAGGCGC CGATCGCGAC
AAAGGCATCG AACTGATGAA GAAGACCGAC GTCGGCCTCG CGGTCGCGGA CATCGGCGCG
GCCGCCGATG CATTGCGCGC CCGCCCCGAG GTCGCCGGCA AGCTCGCCGC GATCGGCTAC
TGCTTCGGTG GCCAGCTCGC GTACCGCGCG GCCGCGACGG GCAAGGTCGA TGCGGCGGTC
GCCTATTACG GCGGCGGCAT CCAGAACGCG CTCGACCTCG CCGGCAAGGT CACGCAGCCG
ATCCTGTTCC ACTACGCGGA GAACGACCAC GGGATCCCGC TCGACGCCGT CGAACAGGTG
AAGGGGGCGT TCGCGGGCCG CCACAACGCA TCGTTCCACG TGTACCCGGG CGCCGAGCAC
GGCTTCAACT GCACGGACCG CGCGTCCTAC AACCAGCGCG CGTCGGCCCT CGCGCACGGC
CGCACGCTGA CGTTCCTCGC CGAGCACCTG TAA
 
Protein sequence
MTAQWIDIPT GNDSFGGYLA LPKRGKGPAV IIIQEIFGVN AHIRAVADQY AADGFVALAP 
DVFWRTQPRV ELTYEGADRD KGIELMKKTD VGLAVADIGA AADALRARPE VAGKLAAIGY
CFGGQLAYRA AATGKVDAAV AYYGGGIQNA LDLAGKVTQP ILFHYAENDH GIPLDAVEQV
KGAFAGRHNA SFHVYPGAEH GFNCTDRASY NQRASALAHG RTLTFLAEHL