| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0186 |
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| Symbol | |
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| ID | 6178333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 221996 |
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| End bp | 222757 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641679921 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_001806903 |
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| Protein GI | 172059251 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCC TGCCGATCGC GACCAATCGC TACTTCGACA ATCACTTCGA ACGCCCGGGC
GTGAAGCTGC TGCCGAACGA GTTCTACACG ACGTCCGAGG ACATGGTGCT GATGACCGTG
CTCGGCTCGT GCGTCGCCGC GTGCCTGCAC GATCCGCTCG CGGGCATCGG CGGGATGAAT
CACTTCATGC TGCCCGACGA CGGCGCCGAT GCCGGCGCGG CCGCGTCGGA TTCGATGCGC
TACGGCGCGT ACGCGATGGA AGTGCTGATC AACGAACTGA TCAAGGCCGG CGGGCGCCGC
GAGCGCCTCG AGGCGAAGGT GTTCGGCGGC GCGGCCGTGC TGGCCGGGAT GACGACGATC
AACATCGGCG ATCGCAACGC GGATTTCGTG CGCCGCTATC TCGCGCTCGA GCGCATCCGC
ATCACCGCGG AGGATCTGCA GGGCGTGCAC CCGCGCAAGG TCGCGTTCAT GCCGCGCACC
GGGCGCGCGA TGGTGAAGAA GCTGCGGCTG CAGGTGCCGG GCGTGACCGA GCGCGAAGCC
GCGCTGGCGC GCGAGGCCGA CCGCGTGCGG GCCGGCCGCC AGCGCGCGCA CGTCGAGCTG
TTCGCGGCGA AGCGGCCGGC CGCGCCGCCG CCGGCGCGCC CGCGCATCGA GCTGTTCGGC
GCACGCGGCG CCGGCGGCGC GCAGACGACG ACTACCAAGA CCGCCAGCCC GTATGCCGGC
AGCCCGACCG CGGCCAACCT TTCGAGAAAG CAGGAGGCAT GA
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| Protein sequence | MSGLPIATNR YFDNHFERPG VKLLPNEFYT TSEDMVLMTV LGSCVAACLH DPLAGIGGMN
HFMLPDDGAD AGAAASDSMR YGAYAMEVLI NELIKAGGRR ERLEAKVFGG AAVLAGMTTI
NIGDRNADFV RRYLALERIR ITAEDLQGVH PRKVAFMPRT GRAMVKKLRL QVPGVTEREA
ALAREADRVR AGRQRAHVEL FAAKRPAAPP PARPRIELFG ARGAGGAQTT TTKTASPYAG
SPTAANLSRK QEA
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