| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0149 |
|---|
| Symbol | |
|---|
| ID | 6176096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 174742 |
|---|
| End bp | 176829 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641679884 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_001806867 |
|---|
| Protein GI | 172059215 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAG GCCTCAACCC CGCTCAGAAC GAAGCGGTGC GCTACCTCGA CGGTCCCTGC
CTCGTGCTCG CCGGCGCGGG CAGCGGCAAG ACCCGCGTGA TCACGCAGAA GATCGCGCAC
CTGATCGAAG CGAAAGGCTT CGAGCCGCGC CACATCGCGG CCGTCACGTT CACGAACAAG
GCCGCCGCCG AAATGCGCGA GCGCGTGTCG AAGCTGCTGG AGGGCAAGAC GCTCACCACG
CCCGGCAAGG AAGGCCGCAA GGTGCCCGTC AACCAGCTCA CCGTGTGCAC GTTCCACTCG
CTCGGCGTGC AGATCCTGCG CCAGGAGGCC GAGCACGTCG GGCTGAAGCC GCAGTTCTCG
ATCATGGATT CGGACGATTG CTTCGGGATG ATCCAGGAGC AGATCGGCAC CACCGACAAG
GGCTTGATCC GCAAGATCCA GAGCATCATT TCGCTGTGGA AGAACGGCCT GATCATGCCC
GACGAGGCGA TGACGATCGC GGCCAACGAG GACGAGCACC AGGCGGCGCT GGTCTACCGC
AACTACGTCG CGACGCTGCA TGCGTACCAG GCGGTCGACT TCGACGACCT GATCCGCCTG
CCGGCCGAGC TGTTCGCGAA GAACGAACAG GTGCGCGACC GCTGGCAGAA CAAGCTGCGC
TATCTGCTGA TCGACGAATA CCAGGACACC AACGCGTGCC AGTACGAGCT GCTGAAGCAG
CTCGCCGGCC CGCGCGCCGC GTTCACGGCG GTGGGCGACG ACGACCAGGC GATCTACGGC
TGGCGCGGCG CGACGCTCGA AAACCTCGCG CAGCTCGGCA AGGATTTCCC GAAGCTGCAC
GTGATCAAGC TCGAGCAGAA CTACCGGTCA ACCGTGCGGA TCCTGACCGC CGCGAACAAC
GTGATCGCCA ACAACCCGAA GCTGTTCGAG AAGAAGCTGT GGTCCGAGCA CGGGATGGGC
GACTCGATCA CCGTCACGCC GTGCAACGAC GAGGAACATG AAGCCGAATC GGTCGTGTTC
CGGCTGTCCG CGCACAAGTT CGAGCGGCGC GCGCAGTTCC GCGACTACGC GATCCTGTAT
CGCGGCAACT TCCAGGCGCG GATCTTCGAG CAGGTGCTGC GGCGCGAGCG GATTCCGTAC
GTGCTGTCGG GCGGCCAGTC GTTCTTCGAC AAGGCCGAGA TCAAGGATCT GTGCGCGTAT
CTGCGCCTGA TCGCGAACGC CGATGACGAT CCCGCGTTCA TCCGCGCGGT CACGACGCCG
CGCCGCGGGA TCGGCAACAC GACGCTCGAG GCGCTCGGCT CGTTCGCCGG CCAGGCCAAG
GTGTCGCTGT TCGAGGCCGT GTACATGGGC GGGATCGAGG CGCGGCTGTC CGCGCGGCAG
GTCGAGCCGC TGCGGATGTT CTGCGACTTC ATCCAGCGCC TGACCGATCG CGCGGACAAG
GAGCCCGCGA CCGTCGTGCT CGACGACATG ATGGAGGCCA TCCACTACGA GGCCTACCTG
TACGACGCGT TTGACGAGCG GCAGGCGCAG TCGAAGTGGC AGAACGTGCT CGAATTCCTC
GAGTGGCTCA AGCGCAAGGG CACGAAGCCC GAGACGGAAG CCGTCGACGG CGAGGCGGAA
GGGTTCCACA ACGCGGACGG GCTCGCCGAT ACCGGCAAGA ACCTGCTCGG CCTGATCCAG
ACCGTCGCGC TGATGTCGAT GCTCGAAGGC AAGGACGAGG ATCCGGACGC CGTGCGGCTG
TCGACCGTCC ATGCATCGAA GGGCCTCGAG TATCCGCACG TGTTCCTGGT CGGCGTCGAG
GAAGGCATCA TGCCGCACCG CGGCGGCAGC GAGGACGACG GCCCGATCGA CAGCGAGCGG
ATCGAGGAGG AGCGCCGGCT GATGTACGTC GCGATCACGC GCGCGCAGCG CAGCCTGCAC
CTGAACTGGT GCAAGAAGCG CAAGCGGGCG CGCGAGACGG TCGTGTGCGA GCCGTCGCGC
TTCATCCCCG AGATGGGGCT CGACGAAGCG CCGCCGCCGA CGCCGGAGGA AGCGCCGATG
ACGCCGAAGG ACCGGCTCGC GAGCCTGAAG GCGTTGTTGC AGAAGTGA
|
|---|
| Protein sequence | MSAGLNPAQN EAVRYLDGPC LVLAGAGSGK TRVITQKIAH LIEAKGFEPR HIAAVTFTNK
AAAEMRERVS KLLEGKTLTT PGKEGRKVPV NQLTVCTFHS LGVQILRQEA EHVGLKPQFS
IMDSDDCFGM IQEQIGTTDK GLIRKIQSII SLWKNGLIMP DEAMTIAANE DEHQAALVYR
NYVATLHAYQ AVDFDDLIRL PAELFAKNEQ VRDRWQNKLR YLLIDEYQDT NACQYELLKQ
LAGPRAAFTA VGDDDQAIYG WRGATLENLA QLGKDFPKLH VIKLEQNYRS TVRILTAANN
VIANNPKLFE KKLWSEHGMG DSITVTPCND EEHEAESVVF RLSAHKFERR AQFRDYAILY
RGNFQARIFE QVLRRERIPY VLSGGQSFFD KAEIKDLCAY LRLIANADDD PAFIRAVTTP
RRGIGNTTLE ALGSFAGQAK VSLFEAVYMG GIEARLSARQ VEPLRMFCDF IQRLTDRADK
EPATVVLDDM MEAIHYEAYL YDAFDERQAQ SKWQNVLEFL EWLKRKGTKP ETEAVDGEAE
GFHNADGLAD TGKNLLGLIQ TVALMSMLEG KDEDPDAVRL STVHASKGLE YPHVFLVGVE
EGIMPHRGGS EDDGPIDSER IEEERRLMYV AITRAQRSLH LNWCKKRKRA RETVVCEPSR
FIPEMGLDEA PPPTPEEAPM TPKDRLASLK ALLQK
|
|---|
| |