| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0120 |
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| Symbol | |
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| ID | 6178748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 139817 |
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| End bp | 140605 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641679855 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001806838 |
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| Protein GI | 172059186 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.614361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACG GACACACCCT GAAACTCGCG TTCGCACTCG CATGCGCGCT CGGCGCCGGT
GCGGCGTTCG CCGACGGCCA GACCCTGCGT TTCGGCCTGG AGGCGCAATA CCCGCCGTTC
GAATCGAAGG CGCCGAACGG CGACCTGCAG GGCTTCGACA TCGACGTCGG CAATGCCGTC
TGCCAGAGCG CGAAGCTGTC GTGCAAGTGG GTCGAGACGT CGTTCGACGG ATTGATTCCC
GCGCTCAAGG GCCGCAAGTT CGACGCGATC AACTCGGCGA TGAATGCGAC CGAACAGCGG
CGCCAGGCGA TCGACTTCAC GACGATCATC TACCGCGTGC CGACGCAACT GATCGCGCGC
ACCGGCAGCG GCCTGCTGCC GACGCCGGAA TCGCTGAAGG GCAAGCGCGT CGGCGTGCTG
CAGGCGTCGA TCCAGGAAAC CTACGCGAAG GCGCACTGGG AGCCGGCCGG CGTGTCGGTC
GTCGCGTACC AGGACCAGAA CCAGGCGTAT GCGGATCTCG TGGCGGGTCG CGTCGACGCG
ACGCTGGTGC TGGCGCCGGC CGGCCAGCGC GGCTTCCTGT CGCGTCCGGA TGGCAAGGGC
TTCTCGTTCG TCGGTCAGCC GGTGCGCGAC GACAAGATTC TCGGCAGCGG GATCGCGTTC
GGCCTGCGCA AGGGCGACGA CGCGCTGAAG GCGAAGCTCG ATGCGGCGAT CGACAAGCTG
AAGGCGGACG GCACGGTGAA GTCGCTCGGC CAGAAGTACT TCGGCGACAT CGACATTTCC
ACCCGGTAA
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| Protein sequence | MKHGHTLKLA FALACALGAG AAFADGQTLR FGLEAQYPPF ESKAPNGDLQ GFDIDVGNAV
CQSAKLSCKW VETSFDGLIP ALKGRKFDAI NSAMNATEQR RQAIDFTTII YRVPTQLIAR
TGSGLLPTPE SLKGKRVGVL QASIQETYAK AHWEPAGVSV VAYQDQNQAY ADLVAGRVDA
TLVLAPAGQR GFLSRPDGKG FSFVGQPVRD DKILGSGIAF GLRKGDDALK AKLDAAIDKL
KADGTVKSLG QKYFGDIDIS TR
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