| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0111 |
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| Symbol | |
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| ID | 6177135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 124749 |
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| End bp | 127010 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641679846 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001806829 |
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| Protein GI | 172059177 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA CCTACCTGCG CGTCGCGCTC GACCACCCGC TCGCCACCCT GTTCGACTAC
CGCTGCGACG TCCAGCCGGC GCCCGCGCCC GGCACGCTCG TCCAGGTGCC GTTCGGCAAG
CGGCAAGTCG TCGGGCTCGT ATGCGAAGTG ACGACTCACA CCGACGTGCC GCCGTCCCGG
TTGCGCGCGA TCGACGCAAT CTGTACCGAA CTGCCGTCGC TGGCGCCCGA CTGGCTCGCG
CTCGTGTCGT TCGCGGCCGA TTACTACCAG CGCGGCCGCG GCGAAGTCGC GCTGCCGGCG
CTGCCGCAGG CGTTGCGCGA TGCGCAGCGC TGGGGGCGGC TGCTCGCGCC GGAGGTCCGC
TACCGGCTGA GCGAAGCCGG CCGCGCCGCG CTTCCCGACG CACTGCCCGC GCGCGGGGCC
GCGTTGCGGC GGCTCGCGCA GGCGCTCGCC GACACCGATT CGCTGACGTT GCCCGACGTG
CGCGCGTTGC ACCCGAAGGC GGTCGCCACG CTCGATGACT GGGCGGCGCG CGGCTGGGTC
GCGATCGAGG AGATCGGCTG GGCCGATGCG CCTGTGCCCA AAGCTGTGGA TAACCTGTCG
ACAACCAGTG GACGAGCTGT GCCGCCGGCG CTCACCGACC AGCAGGCCGA GGCGCTCGAC
GCGATCCGCG CCGCGCAGGG TTTCGCGCCG TTCCTGCTGC ATGGCGTGAC GGGCAGCGGC
AAGACCGAGG TCTATCTGCA TGCGCTTGCC GCGCTGCTCG ACGCGCGGCC CGACGCGCAG
GCGCTCGTGC TCGTGCCCGA AATCAACCTG ACGCCGCAGT TCGAGGCCGC GTTTCGCGCG
CGCTTCGCGG GCACCCTCGC GGACGACGCG ATCGTCACGC TGCACAGCGG GCTCGCCGAG
GGCGAACGCG CGCGCAACTG GCTCGCCGCT CACACGGGCC GCGCGCGGAT CGTGCTCGGC
ACGCGGCTCG CGGTGCTCGC GTCGCTGCCG ACGCTCGCGC TGATCGTCGT CGACGAGGAG
CACGAGCCCG CGTACAAGCA GCAGGAAGGG TTGCGCTATT CGGCGCGCGA CCTCGCGGTG
TGGCGCGCGA AACATCTCGG CATTCCGGTC GTGCTCGGTT CCGCGACGCC GTCGCTCGAA
AGCTGGTGGC TGGCCGAGCA GGGGCGCTAC ACGCGGCTCA CGCTGTCGCG CCGCGCGGTG
GCCGACGCGA CGCTGCCCAC CGTGCGGCTG ATCGATCTCG AAGAGGAGCG GCGGCGCGGG
CGCGCGTCGC TGGGCGGGCT GTCGGGGCCG CTCGTCGCGG CGCTGAAGGC GCGCCTCGAG
CGCGGCGAAC AGAGCCTCGT GTTCCTGAAT CGGCGCGGTT ACGCGCCGCA GCTCGCGTGC
GACGCGTGCG GCTGGGTCGC CGGTTGCCCG CGCTGCAGCG CCTACGTCGT GCTGCACAAG
CCCGAGCATG CGCTGCGCTG CCATCACTGC GGCTGGGAAG CGCGTATTCC GCGCTCGTGC
CCGGAATGCG GGAACGTCGA CATCGCGCCG CTCGGGCGCG GCACGCAGCG CATCGAGGAA
GCGCTCGCCG AGGCCGTGAC GGGCGCGCGG ATCCTGCGGA TCGACGCGGA CAGCACACGA
CGCAAGGGCA GCGCGCAGGC GTTGTTCTCG GACGTGCACG CCGGTGAAGT CGACATCCTG
GTCGGCACGC AGATGATCGC GAAGGGGCAC GATTTCCAGC GCGTGTCGCT CGTCGGCGTG
CTCAATGCGG ATACCGCGCT GTTCTCGCAC GACTTCCGCG CGAGCGAGCG GCTGTTCGCG
CAGCTGATGC AGGTGAGCGG TCGCGCCGGG CGCGCCGGGC TACCCGGCGA GGTGCTGGTG
CAGACGCGTT ATCCGCGTCA CGCGCTGTAT CACGCGCTCG GCCGGCAGGA TTACGTCGGC
TTCGCGAATT CGACGCTCGG CGAGCGCCGC GACGCGCACC TGCCGCCGTT CGTCTACCAG
GCGCTGCTGC GCGCCGAAGG ACGCACGCTC GACGCGGCGC TCGCGTTCCT GCTGCAGGCC
GCGGCCGCGC TGCCGGGGCT GCCGGGCGCC GATCGGGTGA CCGTATACGA CGCGGTGCCG
ATGACGATCG TGAAGGTCGC GAACGTCCAC CGCGCGCAGC TGCTGCTCGA AAGCGCGTCG
CGGGCGGCCC TGCAGCATGC GTTGCGCGCC TGGCAGCCGG AGCTGCGTGC GCTGAAGGGC
GTACACCGGT GGAGCCTCGA GGTCGATCCG CTGGATATCT GA
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| Protein sequence | MADTYLRVAL DHPLATLFDY RCDVQPAPAP GTLVQVPFGK RQVVGLVCEV TTHTDVPPSR
LRAIDAICTE LPSLAPDWLA LVSFAADYYQ RGRGEVALPA LPQALRDAQR WGRLLAPEVR
YRLSEAGRAA LPDALPARGA ALRRLAQALA DTDSLTLPDV RALHPKAVAT LDDWAARGWV
AIEEIGWADA PVPKAVDNLS TTSGRAVPPA LTDQQAEALD AIRAAQGFAP FLLHGVTGSG
KTEVYLHALA ALLDARPDAQ ALVLVPEINL TPQFEAAFRA RFAGTLADDA IVTLHSGLAE
GERARNWLAA HTGRARIVLG TRLAVLASLP TLALIVVDEE HEPAYKQQEG LRYSARDLAV
WRAKHLGIPV VLGSATPSLE SWWLAEQGRY TRLTLSRRAV ADATLPTVRL IDLEEERRRG
RASLGGLSGP LVAALKARLE RGEQSLVFLN RRGYAPQLAC DACGWVAGCP RCSAYVVLHK
PEHALRCHHC GWEARIPRSC PECGNVDIAP LGRGTQRIEE ALAEAVTGAR ILRIDADSTR
RKGSAQALFS DVHAGEVDIL VGTQMIAKGH DFQRVSLVGV LNADTALFSH DFRASERLFA
QLMQVSGRAG RAGLPGEVLV QTRYPRHALY HALGRQDYVG FANSTLGERR DAHLPPFVYQ
ALLRAEGRTL DAALAFLLQA AAALPGLPGA DRVTVYDAVP MTIVKVANVH RAQLLLESAS
RAALQHALRA WQPELRALKG VHRWSLEVDP LDI
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