| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0110 |
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| Symbol | hemE |
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| ID | 6177213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 123173 |
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| End bp | 124300 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641679845 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001806828 |
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| Protein GI | 172059176 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.760433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTT GCCTTCGCAT CGTCGCTCCT ACCGTGGCCC ATAACCTGCT CAACGACACC
TTCCTGCGTG CGCTTCTGCG CGAGCCGACC GACTACACGC CGATCTGGCT GATGCGCCAG
GCGGGCCGCT ACCTGCCCGA ATACAACGCG ACGCGCGCAC GCGCCGGCAG CTTCCTCGGC
CTCGCGAAGA ATCCCGACTA CGCGACCGAA GTGACGCTGC AGCCGCTCGA GCGCTTCCCG
CTCGACGCCG CGATCCTGTT CTCGGACATC CTGACGATTC CCGACGCGAT GGGTCTCGGC
CTCGACTTCC AGGTCGGCGA AGGGCCGAAG TTCGCGCATC CGGTGCGCAC CGAGGCCGAC
GTCGCGAAGC TCGCGGTGCC GGACATCGAA GCGACGCTCG GTTACGTGAC AGGCGCCGTG
CGCGAGATCC GCCGCGCGCT GACCGACGGC CAGGGGCGCC AGCGCGTGCC GCTGATCGGC
TTCTCGGGCA GCCCGTGGAC GCTCGCGTGC TACATGGTCG AAGGCGGCGG GTCGGACGAT
TTCCGCACGG TGAAGTCGAT GGCGTATTCG CGCCCCGACC TGATGCACCG GATCCTCGAC
GTGAACGCGC AGGCCGTGGC CGCGTACCTG AACGCGCAGA TCGAAGCCGG CGCGCAGGCC
GTGATGATCT TCGATACGTG GGGCGGCGCG CTGGCGGACG GCGCATACCA GCGCTTCTCG
CTCGACTACA TCCGCCGCGT GGTCGGCCAG CTCAAGCGCG AGCACGACGG CGAGCGCGTG
CCGGTGATCA CGTTCACGAA GGGCGGCGGG CTGTGGCTCG AGGAAATCGC GGCGACCGGC
GTCGACGCGG TCGGGCTCGA CTGGACGGTC AACCTCGGCG CCGCGCGCGA GCGCGTCGCG
GGGCGCGTTG CGCTGCAGGG CAACCTCGAC CCGACGATCC TCTTTGCGCC GCCGGCCGCG
GTGCGCGAGC AGGCGCGCGC GGTACTCGAC AGCTACGGCA ATCATCCGGG CCACGTATTC
AACCTCGGCC ACGGCATTTC GCAGTTCACG TCGCCGGATC ACGTCGCCGA ACTCGTCGAC
GAAGTGCATA GCCACAGCCG CAAGATCCTT GGCGGAGCGG CGGGCTGA
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| Protein sequence | MPLCLRIVAP TVAHNLLNDT FLRALLREPT DYTPIWLMRQ AGRYLPEYNA TRARAGSFLG
LAKNPDYATE VTLQPLERFP LDAAILFSDI LTIPDAMGLG LDFQVGEGPK FAHPVRTEAD
VAKLAVPDIE ATLGYVTGAV REIRRALTDG QGRQRVPLIG FSGSPWTLAC YMVEGGGSDD
FRTVKSMAYS RPDLMHRILD VNAQAVAAYL NAQIEAGAQA VMIFDTWGGA LADGAYQRFS
LDYIRRVVGQ LKREHDGERV PVITFTKGGG LWLEEIAATG VDAVGLDWTV NLGAARERVA
GRVALQGNLD PTILFAPPAA VREQARAVLD SYGNHPGHVF NLGHGISQFT SPDHVAELVD
EVHSHSRKIL GGAAG
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