Gene BamMC406_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0103 
Symbol 
ID6177421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp114453 
End bp114992 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content65% 
IMG OID641679838 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_001806821 
Protein GI172059169 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.163792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.702124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC TTGCAACCAT CGCCCGCCCT TACGCAGAAG CGCTGTTCCG CGTGGCCGAG 
GGAGGTGACA TCGCCGCCTG GTCCACGCTC GTGCAAGAGC TGGCCCAGGT TGCGCGTCTG
CCGGAAGTGC TGTCGGTCGC GTCGAGCCCG AAGGTGACGC GCACGCAAGT GGTCGAGCTG
CTGCTTGCTG CGGTGAAGTC GCCGGTCGCG GCCGGCGCGG AAGCGAAGAA CTTCGTGCAG
ATGCTGGTCG ACAATCATCG TATCGCGCTG CTGCCGGAAA TCGCCGAGCA GTTCGAGGCG
CTCAAGAACG AACGTGAAGG TGCAGCCGAC GCCGAGATCG TGAGCGCGTT CCCGCTGAAC
GGCGCGGATC TCGAAAGTCT CGTCTCTGGC CTCGAACGCA AGTTCAAGCG CAAGCTGAAG
CCGACGGTCG AAGTCGATTC GTCGCTGATC GGCGGCGTGC GCGTGACGGT CGGCGACGAA
GTGCTCGACA CCTCGGTTCG CGCGCGCCTC GCATCGATGC AGGCTGCCTT GACCGCCTGA
 
Protein sequence
MAELATIARP YAEALFRVAE GGDIAAWSTL VQELAQVARL PEVLSVASSP KVTRTQVVEL 
LLAAVKSPVA AGAEAKNFVQ MLVDNHRIAL LPEIAEQFEA LKNEREGAAD AEIVSAFPLN
GADLESLVSG LERKFKRKLK PTVEVDSSLI GGVRVTVGDE VLDTSVRARL ASMQAALTA