| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0095 |
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| Symbol | gidB |
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| ID | 6176952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 107863 |
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| End bp | 108549 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641679830 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001806813 |
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| Protein GI | 172059161 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.706349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGCGC GTCGCGCGCC GGCGGTTAAT CGGGACGTAC TTGAACAGAT GCTCGTCGAC
GGCACGGCCG CGCTCGACAT CGCATTGACG GATGCACAAC GCAACCAGCT GCTCGACTAT
GTCGCGCTGC TCGGGAAATG GAACGCGGTC TACAACCTGA CCGCGATCCG CGACCCGAAG
CAGATGCTGA TCCAGCACAT TCTCGATTCG CTCTCCATCG TTCCGCATCT GCGCGACCGT
GCATCGGCGC GCGTGCTCGA CGTGGGTTCG GGCGGCGGGC TGCCCGGCAT TGTGCTGGCG
ATCGTCCAGC CGGACTGGCA GGTGACGTTG AACGATATCG TGCAGAAAAA GTCTGCATTC
CAGACGCAAA TGCGCGCGGA GCTGAAGCTC GCGAACCTGT CGGTCGTCAC CGGGCGGGTC
GAATTGCTGC AGCCCGGTGT CGAAGTGCCG GAAAAATTCG ACATGATCGT GTCCCGCGCC
TTCGCGGATC TATCCGACTT CGTTAAACTT GCTCGTCATC TCGTCGCGCC CGGCGGCTCG
ATCTGGGCAA TGAAGGGTGT TCACCCGGAC GACGAAATTG CACGACTGCC GGAAGGCAGC
CGTGTAAAGC AGACGATGCG GCTTGCAGTA CCGATGCTCG ATGCCGAACG GCACCTGATC
GAGGTGGTCG TCGACGAGGC GAATTGA
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| Protein sequence | MTARRAPAVN RDVLEQMLVD GTAALDIALT DAQRNQLLDY VALLGKWNAV YNLTAIRDPK
QMLIQHILDS LSIVPHLRDR ASARVLDVGS GGGLPGIVLA IVQPDWQVTL NDIVQKKSAF
QTQMRAELKL ANLSVVTGRV ELLQPGVEVP EKFDMIVSRA FADLSDFVKL ARHLVAPGGS
IWAMKGVHPD DEIARLPEGS RVKQTMRLAV PMLDAERHLI EVVVDEAN
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