Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0093 |
Symbol | |
ID | 6177375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 104656 |
End bp | 105414 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641679828 |
Product | ABC transporter related |
Protein accession | YP_001806811 |
Protein GI | 172059159 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.899173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGG ACACGACGAT GCCGATTCTC GAGGTGCGCG GACTGGCGGT CCGATACGGG AAAGTCGAGG CGCTGCACGG TGCGGCGATC AAGGTGGGCG CCGGGCAGAT CGTCAGCGTC ATCGGCCCGA ACGGTGCCGG CAAGTCGACG ATGCTGAACG CGATCATGGG TGCGTTGCCC GTGACCGGGC ATGCGTCGGG CACGGTCATG TATCGCGGCC ACGACGTGGG CGCGCTACCG GTCGAGCAGC GCGTCGCGCG CGGGATGTGC CTCGTGCCGG AAAAGCGCGA GCTGTTCAGC ACGATGACGG TCGAGGACAA CCTCGTGCTG GGCGCGTATC GCCGCAAGCT CGCGGGCGAG TCCAACTTTC TCGACCAGCT CGATCATGTG TTTGCGCTGT TTCCGCGGCT CAAGGAGCGG CGCAAGCAGG CGGCCGGTAC GCTGTCGGGC GGCGAGCGGC AGATGCTTGC GGTGGGCCGC GCGCTGATGG GCAAACCCGA CCTGCTGATG CTCGATGAGC CGAGCCTCGG GTTGGCACCG CTGATCGTGA AGGAAATTTT TCATATCATC AGCGCGTTGC GCGGCACGGG TGTGGCGACG CTGCTGATCG AGCAGAACGC GCGGGCGGCA CTGCAGATCT CGGACTACGG TTATGTACTG GAGACGGGGG AGCTAGCGCT GGAAGGGCCG GCGGCCGAGC TGGCACAAAA TCCGCGCGTG ATCGAAACTT ACCTGGGGTT GGCGAAGAAA ACGGCTTGA
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Protein sequence | MTADTTMPIL EVRGLAVRYG KVEALHGAAI KVGAGQIVSV IGPNGAGKST MLNAIMGALP VTGHASGTVM YRGHDVGALP VEQRVARGMC LVPEKRELFS TMTVEDNLVL GAYRRKLAGE SNFLDQLDHV FALFPRLKER RKQAAGTLSG GERQMLAVGR ALMGKPDLLM LDEPSLGLAP LIVKEIFHII SALRGTGVAT LLIEQNARAA LQISDYGYVL ETGELALEGP AAELAQNPRV IETYLGLAKK TA
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