Gene BamMC406_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0091 
Symbol 
ID6177752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp101812 
End bp102867 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID641679826 
Productinner-membrane translocator 
Protein accessionYP_001806809 
Protein GI172059157 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.452731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCT CGATTGCGGC GATCCTCGCG CAAGACGGCA TCACGACCGG CGCCATTTAT 
GCATTGCTGT CGCTGGCGCT CGTGCTGGTG TTTTCCGTCA CGCGGGTGAT CTTCATTCCC
CAGGGCGAAT TCGTCGCCTA CGGCGCGCTC ACGCTTGCGG CGTTGCAGGC GCAGAAATTT
CCCGCGACCT GCTGGCTGTT GTTCGTGATG GGCATCGCGT GCTTCATGCT GGAAGTCGGC
GGCCTGGTCC GCCATCGCGA ACGCCGCCAC CAACTCGGCC GCACGCTCGC GACGCTGGCG
AGCCGCCACG TGCTGCTGCC GCTTGCGGTG TTCGCGCTCA CGCGCAGCTT TGCAGCGCAG
CCGTTGCCGA TGCTCGCGCA GATCGCGCTG ACGCTTGCGA TCGTCGTGCC GATGGGGCCG
TTCGTCTACC GGCTCGTCTA TCAACCGATC GCCGAAGGCA CGACGCTGCT GCTGCTGATC
GTGTCGGTCG CCGTCCATTT CGCAATGGTC GGCCTCGGGC TCGTGATGTT CGGCGCGGAA
GGTTCGCGCA CCAACGGATT CGCTGATGCA TCGCTGTCGG TCGGCAGCAT GACGGTGTCG
GTGCAGAGCA TTCTCGTGGT CGTGACCGCG CTGGTGCTGA TCGGTGCGCT CTACGTGTAC
TTCGGCCGCA CGATCGCCGG CAAGGCGCTG CGCGCGACGT CGGTGAACCG GCTCGGCGCG
CGGCTCGTCG GCATCGGCAC GACCGAAGCG GGGCGGCTGG CGTTCACGCT GGCGGCGGGG
CTCGGCGTGC TGTCCGGCAT CCTCGTCGGC CCGCTGACGA CCATCTATTA CGACTCCGGC
TTCCTGATCG GCCTGAAGGG CTTCGTCGGC GCGATCATCG GCGGGCTGGT CAGTTATCCG
CTCGCGGCCG CGGGCTCGCT GCTCGTCGGT GTGCTCGAAT CGTATTCGTC GTTCTGGGCG
AGCGCGTACA AGGAAGTGAT CGTGTTCACG CTGATCATCC CGGTGCTGCT GTGGCGCAGT
TTCGCGACGC CGCATGCGGA AGAGGAAGAG GAGTGA
 
Protein sequence
MDFSIAAILA QDGITTGAIY ALLSLALVLV FSVTRVIFIP QGEFVAYGAL TLAALQAQKF 
PATCWLLFVM GIACFMLEVG GLVRHRERRH QLGRTLATLA SRHVLLPLAV FALTRSFAAQ
PLPMLAQIAL TLAIVVPMGP FVYRLVYQPI AEGTTLLLLI VSVAVHFAMV GLGLVMFGAE
GSRTNGFADA SLSVGSMTVS VQSILVVVTA LVLIGALYVY FGRTIAGKAL RATSVNRLGA
RLVGIGTTEA GRLAFTLAAG LGVLSGILVG PLTTIYYDSG FLIGLKGFVG AIIGGLVSYP
LAAAGSLLVG VLESYSSFWA SAYKEVIVFT LIIPVLLWRS FATPHAEEEE E