Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0091 |
Symbol | |
ID | 6177752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 101812 |
End bp | 102867 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641679826 |
Product | inner-membrane translocator |
Protein accession | YP_001806809 |
Protein GI | 172059157 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.452731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTTCT CGATTGCGGC GATCCTCGCG CAAGACGGCA TCACGACCGG CGCCATTTAT GCATTGCTGT CGCTGGCGCT CGTGCTGGTG TTTTCCGTCA CGCGGGTGAT CTTCATTCCC CAGGGCGAAT TCGTCGCCTA CGGCGCGCTC ACGCTTGCGG CGTTGCAGGC GCAGAAATTT CCCGCGACCT GCTGGCTGTT GTTCGTGATG GGCATCGCGT GCTTCATGCT GGAAGTCGGC GGCCTGGTCC GCCATCGCGA ACGCCGCCAC CAACTCGGCC GCACGCTCGC GACGCTGGCG AGCCGCCACG TGCTGCTGCC GCTTGCGGTG TTCGCGCTCA CGCGCAGCTT TGCAGCGCAG CCGTTGCCGA TGCTCGCGCA GATCGCGCTG ACGCTTGCGA TCGTCGTGCC GATGGGGCCG TTCGTCTACC GGCTCGTCTA TCAACCGATC GCCGAAGGCA CGACGCTGCT GCTGCTGATC GTGTCGGTCG CCGTCCATTT CGCAATGGTC GGCCTCGGGC TCGTGATGTT CGGCGCGGAA GGTTCGCGCA CCAACGGATT CGCTGATGCA TCGCTGTCGG TCGGCAGCAT GACGGTGTCG GTGCAGAGCA TTCTCGTGGT CGTGACCGCG CTGGTGCTGA TCGGTGCGCT CTACGTGTAC TTCGGCCGCA CGATCGCCGG CAAGGCGCTG CGCGCGACGT CGGTGAACCG GCTCGGCGCG CGGCTCGTCG GCATCGGCAC GACCGAAGCG GGGCGGCTGG CGTTCACGCT GGCGGCGGGG CTCGGCGTGC TGTCCGGCAT CCTCGTCGGC CCGCTGACGA CCATCTATTA CGACTCCGGC TTCCTGATCG GCCTGAAGGG CTTCGTCGGC GCGATCATCG GCGGGCTGGT CAGTTATCCG CTCGCGGCCG CGGGCTCGCT GCTCGTCGGT GTGCTCGAAT CGTATTCGTC GTTCTGGGCG AGCGCGTACA AGGAAGTGAT CGTGTTCACG CTGATCATCC CGGTGCTGCT GTGGCGCAGT TTCGCGACGC CGCATGCGGA AGAGGAAGAG GAGTGA
|
Protein sequence | MDFSIAAILA QDGITTGAIY ALLSLALVLV FSVTRVIFIP QGEFVAYGAL TLAALQAQKF PATCWLLFVM GIACFMLEVG GLVRHRERRH QLGRTLATLA SRHVLLPLAV FALTRSFAAQ PLPMLAQIAL TLAIVVPMGP FVYRLVYQPI AEGTTLLLLI VSVAVHFAMV GLGLVMFGAE GSRTNGFADA SLSVGSMTVS VQSILVVVTA LVLIGALYVY FGRTIAGKAL RATSVNRLGA RLVGIGTTEA GRLAFTLAAG LGVLSGILVG PLTTIYYDSG FLIGLKGFVG AIIGGLVSYP LAAAGSLLVG VLESYSSFWA SAYKEVIVFT LIIPVLLWRS FATPHAEEEE E
|
| |