Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0090 |
Symbol | |
ID | 6176967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 100453 |
End bp | 101610 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641679825 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001806808 |
Protein GI | 172059156 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.230544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATGA ATCGATGGAT GGAGGTTTTG CTTGCCGCGG GCCTCGTGTG TGCGGCGGCC ACGGCGTCGG CACAGGTGAA GATCGGCGTG ACGCTGTCGG CCACCGGGCC GGCCGCATCG CTCGGGATTC CGGAAAAGAA CACGATCGCG CTGCTGCCGA AGGAAATCGC GGGCAAGAGC GTCCAGTACA TCGTGCTCGA CGATGCGTCC GACACGAGCC GCGCGGTGCA GAACGTGCGC AAGCTGATCG ACGAGGATCA CGTCGACGCG ATCATCGGTT CGTCCGTCAC GCCGAATTCG CTCGCGATGC TCGACCCGGT GTCGCAGGGC AAGACGCCGA CGATCTCGCT CGCGGCGAGT GCGCAGATCA TCGCGCCGAT GGACACGAAG CGCGCGTGGA TGTTCAAGGT GCCGCAAAAC GACCAGCTGA TGGCCGACGC GATCGCCGGC TACATGGCGA AGCACGGCGT GAAGACGATC GGCTTCATCG GCTTCGCCGA CGCGTACGGC GACAGCTGGT ACAACACATT CAACGCGGCC GCGACGAAGA ACGGGTTGAA GGTCGTGTCG AACGAGCGCT ACAACCGCAC CGATGCGTCG GTGATGGGGC AGGTGCTGAA GCTGCTGGGC TCGAATCCCG ACGCGGTGCT GATCGCCGGT TCCGGCACGC CGGCCGCGCT GCCCGCCAAG ACGCTCAAGG AGCGCGGCTA CAAGGGCAAG GTGTACCAGA CGCACGGCGT CGCGAACAAC GACTTCCTGC GCGTGTGCGG CAAGGATTGC GAAGGCGAGA TCCTGCCGGC CGGGCCGGTG CTCGTGACCG ACCAGCTGCC CGATTCGAAT CCGGTGAAGA AGCCGGCGCT CGGCTACAAG GCTGCGTACG AGAAGGCGTA CGGCGCGGGC TCGCTGTCGA CCTTCGGCGG GCATGCGTGG GATGCGGGGC TGCTGCTGCA GCGTGCGATT CCCGACGCGC TGAAGAAGGG CCAGCCAGGC ACCGAGGCGT TCCGCGAGGC GCTGCGCGCG TCGCTCGAGA GCGTGAAGGA CCTGCCCGTG TCGCACGGCG TGATCAACAT GACGTCGACC GACCACAACG GCTTCGACAC GCGTGCGCGC GTGATGGTGC AGATCGTCGA CGGCAAGTGG AAGCTGCAGG CCGAGTAA
|
Protein sequence | MKMNRWMEVL LAAGLVCAAA TASAQVKIGV TLSATGPAAS LGIPEKNTIA LLPKEIAGKS VQYIVLDDAS DTSRAVQNVR KLIDEDHVDA IIGSSVTPNS LAMLDPVSQG KTPTISLAAS AQIIAPMDTK RAWMFKVPQN DQLMADAIAG YMAKHGVKTI GFIGFADAYG DSWYNTFNAA ATKNGLKVVS NERYNRTDAS VMGQVLKLLG SNPDAVLIAG SGTPAALPAK TLKERGYKGK VYQTHGVANN DFLRVCGKDC EGEILPAGPV LVTDQLPDSN PVKKPALGYK AAYEKAYGAG SLSTFGGHAW DAGLLLQRAI PDALKKGQPG TEAFREALRA SLESVKDLPV SHGVINMTST DHNGFDTRAR VMVQIVDGKW KLQAE
|
| |