Gene BamMC406_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0089 
Symbol 
ID6177131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp98375 
End bp99349 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content67% 
IMG OID641679824 
Productinner-membrane translocator 
Protein accessionYP_001806807 
Protein GI172059155 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.828472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGAA AAGTGCTCTA CGGCGTGCTG CTCGCCGCAC TGCTCGCCGC GCCGTTCATC 
GGCGCATATC CGGTCTTCGT GATGAAGGTG CTCACGTTCG CGCTGTTTGC GGCCGCGTTC
AACCTGCTGA TCGGCTATAC GGGGCTGCTG TCGTTCGGCC ATGCGATGTT CCTCGCGACC
GCCGGCTACG GCACCGGTTA TGCGATCCAG ACGCTCGGCT TCACGCCGGA GCTCGGCGTG
CTGGTCGGCA CGTTCGCCGC GACGCTGCTC GGGCTCGTCG TCGGGCTGTT CGCGATCCGG
CGGCAGGGCA TCTACTTCGC GATGATCACG CTCGCGTTCG CGCAGATGGT CTACTTCATC
TACCTCCAGG CGCCGTTCAC GCGCGGCGAG GACGGCCTGC AGGGCGTGCC GCGCGGCCAC
CTGTTCGGGC TCGTCGACCT GTCGAACGAC GTCGCGCTCT ACTACGTCGT GCTCACGGTG
ATCGTGGCGG CGTGCGCGTT CATCGTGCGA ATCGTGCACT CGCCGTTCGG CCAGGTGCTC
GTCGCGATCA AGGAGAACGA GGCGCGGGCG ATCTCGCTCG GCTACGACAC CGACCGCTTC
AAGCTGCTCG CATTCATCCT GTCGGCCGGG CTCGCGGGGC TGGCCGGTTC GCTGAAGGTG
CTGGTGCTCG GCTTCGAGAC GCTGTCCGAC GCGCACTGGA CGATGTCGGG CCTCGTCGTG
CTGATGACGC TCGTCGGCGG GATGGGCACG TTGTTCGGGC CGTTGCTCGG CGCGGCGCTG
ATCGTCGCGC TGGAGGACCG GCTGGGCGAC ATCGGCGAAT GGCTCGCGTC GGTCACCGGC
ATCGGCTGGT TCCACTCGCT CGGCGAATCG ACGACGATCG TCACGGGGCT GATCTTCATC
GCATGCGTGC TTGCATTCCG GCGCGGGATC GTCGGCGAGA TGGTCGCGCG GGTCAAGACG
CTCAGGCCGT CCTGA
 
Protein sequence
MQRKVLYGVL LAALLAAPFI GAYPVFVMKV LTFALFAAAF NLLIGYTGLL SFGHAMFLAT 
AGYGTGYAIQ TLGFTPELGV LVGTFAATLL GLVVGLFAIR RQGIYFAMIT LAFAQMVYFI
YLQAPFTRGE DGLQGVPRGH LFGLVDLSND VALYYVVLTV IVAACAFIVR IVHSPFGQVL
VAIKENEARA ISLGYDTDRF KLLAFILSAG LAGLAGSLKV LVLGFETLSD AHWTMSGLVV
LMTLVGGMGT LFGPLLGAAL IVALEDRLGD IGEWLASVTG IGWFHSLGES TTIVTGLIFI
ACVLAFRRGI VGEMVARVKT LRPS