Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0089 |
Symbol | |
ID | 6177131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 98375 |
End bp | 99349 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641679824 |
Product | inner-membrane translocator |
Protein accession | YP_001806807 |
Protein GI | 172059155 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.828472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGAA AAGTGCTCTA CGGCGTGCTG CTCGCCGCAC TGCTCGCCGC GCCGTTCATC GGCGCATATC CGGTCTTCGT GATGAAGGTG CTCACGTTCG CGCTGTTTGC GGCCGCGTTC AACCTGCTGA TCGGCTATAC GGGGCTGCTG TCGTTCGGCC ATGCGATGTT CCTCGCGACC GCCGGCTACG GCACCGGTTA TGCGATCCAG ACGCTCGGCT TCACGCCGGA GCTCGGCGTG CTGGTCGGCA CGTTCGCCGC GACGCTGCTC GGGCTCGTCG TCGGGCTGTT CGCGATCCGG CGGCAGGGCA TCTACTTCGC GATGATCACG CTCGCGTTCG CGCAGATGGT CTACTTCATC TACCTCCAGG CGCCGTTCAC GCGCGGCGAG GACGGCCTGC AGGGCGTGCC GCGCGGCCAC CTGTTCGGGC TCGTCGACCT GTCGAACGAC GTCGCGCTCT ACTACGTCGT GCTCACGGTG ATCGTGGCGG CGTGCGCGTT CATCGTGCGA ATCGTGCACT CGCCGTTCGG CCAGGTGCTC GTCGCGATCA AGGAGAACGA GGCGCGGGCG ATCTCGCTCG GCTACGACAC CGACCGCTTC AAGCTGCTCG CATTCATCCT GTCGGCCGGG CTCGCGGGGC TGGCCGGTTC GCTGAAGGTG CTGGTGCTCG GCTTCGAGAC GCTGTCCGAC GCGCACTGGA CGATGTCGGG CCTCGTCGTG CTGATGACGC TCGTCGGCGG GATGGGCACG TTGTTCGGGC CGTTGCTCGG CGCGGCGCTG ATCGTCGCGC TGGAGGACCG GCTGGGCGAC ATCGGCGAAT GGCTCGCGTC GGTCACCGGC ATCGGCTGGT TCCACTCGCT CGGCGAATCG ACGACGATCG TCACGGGGCT GATCTTCATC GCATGCGTGC TTGCATTCCG GCGCGGGATC GTCGGCGAGA TGGTCGCGCG GGTCAAGACG CTCAGGCCGT CCTGA
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Protein sequence | MQRKVLYGVL LAALLAAPFI GAYPVFVMKV LTFALFAAAF NLLIGYTGLL SFGHAMFLAT AGYGTGYAIQ TLGFTPELGV LVGTFAATLL GLVVGLFAIR RQGIYFAMIT LAFAQMVYFI YLQAPFTRGE DGLQGVPRGH LFGLVDLSND VALYYVVLTV IVAACAFIVR IVHSPFGQVL VAIKENEARA ISLGYDTDRF KLLAFILSAG LAGLAGSLKV LVLGFETLSD AHWTMSGLVV LMTLVGGMGT LFGPLLGAAL IVALEDRLGD IGEWLASVTG IGWFHSLGES TTIVTGLIFI ACVLAFRRGI VGEMVARVKT LRPS
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