Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0085 |
Symbol | |
ID | 6178919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 94563 |
End bp | 95342 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641679820 |
Product | ABC transporter related |
Protein accession | YP_001806803 |
Protein GI | 172059151 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTCG GCGACACGAT TCTCGAAACA CGCGGACTGA CGAAGGAATT CAGGGGCTTC ACCGCCGTGA ACGGTGTCAA CCTGCGTGTG CGTCGCGGTG CGATCCATGC GTTGATCGGA CCGAACGGCG CGGGGAAGAC CACCTGCTTC AACCTGCTGA CCAAGTTCCT GACACCGACG GCCGGTCAGA TCGTCTTCAA CGGCATCGAC ATCACCGACG AGCGCCCGGC ACAGGTCGCG CGCCGCGGCA TCATCCGTTC ATTCCAGATC TCGGCGGTAT TCCCGCACCT GAGCGCGCTG CAGAACGTAC GCATCGGCCT GCAACGCTCG CTCGGCACCG AATTCCATTT CTGGCGCAGC GAGCGCACGC TGAAGCGGCT CGACGATCGC GCGATGGACC TGCTCACGCA GGTCGGCCTC ACCGATTTCG CGCACGTGCC GACCGTCGAG CTCGCATACG GCCGCAAGCG CGCGCTCGAG ATCGCGACGA CGCTCGCGAT GGAACCCGAA CTGATGCTGC TCGACGAGCC CACGCAAGGA ATGGGGCACG AAGATGTCGA CCGCGTGACC GCGCTGATCA AGAAGGTCGC GAGCGGCCGC ACGATCCTGA TGGTCGAGCA CAACATGAAC GTGATCGCCG GCATCTCCGA CACGATCACC GTCCTGCAGC GCGGCGAGGT GCTGGCCGAA GGCTCGTATG CGGAGGTGTC GAAGAATCCG CTCGTGATCG AAGCCTACAT GGGCAGCGCC GACGCGGCGC TCGCGGGGGC GCACGCATGA
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Protein sequence | MILGDTILET RGLTKEFRGF TAVNGVNLRV RRGAIHALIG PNGAGKTTCF NLLTKFLTPT AGQIVFNGID ITDERPAQVA RRGIIRSFQI SAVFPHLSAL QNVRIGLQRS LGTEFHFWRS ERTLKRLDDR AMDLLTQVGL TDFAHVPTVE LAYGRKRALE IATTLAMEPE LMLLDEPTQG MGHEDVDRVT ALIKKVASGR TILMVEHNMN VIAGISDTIT VLQRGEVLAE GSYAEVSKNP LVIEAYMGSA DAALAGAHA
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