Gene BamMC406_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0085 
Symbol 
ID6178919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp94563 
End bp95342 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content64% 
IMG OID641679820 
ProductABC transporter related 
Protein accessionYP_001806803 
Protein GI172059151 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCG GCGACACGAT TCTCGAAACA CGCGGACTGA CGAAGGAATT CAGGGGCTTC 
ACCGCCGTGA ACGGTGTCAA CCTGCGTGTG CGTCGCGGTG CGATCCATGC GTTGATCGGA
CCGAACGGCG CGGGGAAGAC CACCTGCTTC AACCTGCTGA CCAAGTTCCT GACACCGACG
GCCGGTCAGA TCGTCTTCAA CGGCATCGAC ATCACCGACG AGCGCCCGGC ACAGGTCGCG
CGCCGCGGCA TCATCCGTTC ATTCCAGATC TCGGCGGTAT TCCCGCACCT GAGCGCGCTG
CAGAACGTAC GCATCGGCCT GCAACGCTCG CTCGGCACCG AATTCCATTT CTGGCGCAGC
GAGCGCACGC TGAAGCGGCT CGACGATCGC GCGATGGACC TGCTCACGCA GGTCGGCCTC
ACCGATTTCG CGCACGTGCC GACCGTCGAG CTCGCATACG GCCGCAAGCG CGCGCTCGAG
ATCGCGACGA CGCTCGCGAT GGAACCCGAA CTGATGCTGC TCGACGAGCC CACGCAAGGA
ATGGGGCACG AAGATGTCGA CCGCGTGACC GCGCTGATCA AGAAGGTCGC GAGCGGCCGC
ACGATCCTGA TGGTCGAGCA CAACATGAAC GTGATCGCCG GCATCTCCGA CACGATCACC
GTCCTGCAGC GCGGCGAGGT GCTGGCCGAA GGCTCGTATG CGGAGGTGTC GAAGAATCCG
CTCGTGATCG AAGCCTACAT GGGCAGCGCC GACGCGGCGC TCGCGGGGGC GCACGCATGA
 
Protein sequence
MILGDTILET RGLTKEFRGF TAVNGVNLRV RRGAIHALIG PNGAGKTTCF NLLTKFLTPT 
AGQIVFNGID ITDERPAQVA RRGIIRSFQI SAVFPHLSAL QNVRIGLQRS LGTEFHFWRS
ERTLKRLDDR AMDLLTQVGL TDFAHVPTVE LAYGRKRALE IATTLAMEPE LMLLDEPTQG
MGHEDVDRVT ALIKKVASGR TILMVEHNMN VIAGISDTIT VLQRGEVLAE GSYAEVSKNP
LVIEAYMGSA DAALAGAHA