| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0071 |
|---|
| Symbol | |
|---|
| ID | 6177267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 81240 |
|---|
| End bp | 82352 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641679806 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_001806789 |
|---|
| Protein GI | 172059137 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.282645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGC TGTTTTCCCC GTTCACGCTG CGCGGCGTGA CCCTTCCGAA CCGGATCGTG
ATCTCCCCGA TGTGCCAGTA CTCCGCCGAG CGTGGCGAGG CGACCGACTG GCACATGATC
CATCTCGGCC ATCTCGCGCT GTCCGGCGCG GGCCTGCTCT GCATCGAAGC GACCGCCGTC
GAACCCGACG GGCGCATCAC GGCCGGCGAC CTCGGGCTGT GGGACGACGT GACCGAAGCG
GCGCTCGAGC CCGTGCTGGC CTCGATCCGC AAGCATTCGT CGGTCCGTGT CGCGATGCAG
TTGTCGCATG CAGGACGCAA GGCGTCGAGC GACGTGCCGT GGAAGGGCGG CCAGCTCGTG
TCCGTCGCCG ATGGCGGCTG GTTGCCGCAC GCGCCGTCGG CGCTGCCGCA CAAGGACGGC
GAGACGCCGC CGCTCGCGCT CGACACCGCG GGCCTGAACC GGATCCGCGC CGCGTTCGCG
GCCGCCGCGA AGCGTGCCGC GCGCCTTGGC ATCGACGCGA TCGAAGTGCA TGCGGCGCAC
GGCTACCTGC TGCACCAGTT CCTGTCGCCG ATCTCGAACC AGCGTACCGA CGAATACGGC
GGCTCGCGGG AGAACCGGAT GCGCTTTCCG CTCGAGATCT TCGAGATCGT GCGCGCGGCG
TTTCCGGAAG ACCGGCCGGT CGGCGTGCGG GTGTCGGCGA CCGACTGGGT CGAGGGCGGC
TGGGAACTCG ACGACACGAT CGCGTTCGCA CACGAACTGA AGCAGCGCGG CTGCGACTGG
ATCGACGTGT CGTCCGGCGG CGTGTCGCCG CTGCAGAAGA TTCCGCTGTC GCCCGGTTAC
CAGGTGCCGT TCGCGCAGGC CGTGAAGCGC GCGGTCGGGA TGCCGACGAT CGCGGTCGGC
CTCATCAACG ATCCCGCGCA TGCGAACCGG CTGATCGAGG CGGGCGACGC CGATCTGGTC
GCGATGGCGC GTGCGATGCT GTACGACCCG CGCTGGCCGT GGCATGCGGC CGCCGAGCTC
GGCGCGCAGG TGTCGGCGCC GCCGCAGTAC TGGCGTTCGC AGCCGCGCGA GCACAAGGCG
TTGTTCGGCG ACATCGCATT CGGCCAGCGT TGA
|
|---|
| Protein sequence | MTALFSPFTL RGVTLPNRIV ISPMCQYSAE RGEATDWHMI HLGHLALSGA GLLCIEATAV
EPDGRITAGD LGLWDDVTEA ALEPVLASIR KHSSVRVAMQ LSHAGRKASS DVPWKGGQLV
SVADGGWLPH APSALPHKDG ETPPLALDTA GLNRIRAAFA AAAKRAARLG IDAIEVHAAH
GYLLHQFLSP ISNQRTDEYG GSRENRMRFP LEIFEIVRAA FPEDRPVGVR VSATDWVEGG
WELDDTIAFA HELKQRGCDW IDVSSGGVSP LQKIPLSPGY QVPFAQAVKR AVGMPTIAVG
LINDPAHANR LIEAGDADLV AMARAMLYDP RWPWHAAAEL GAQVSAPPQY WRSQPREHKA
LFGDIAFGQR
|
|---|
| |