| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0053 |
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| Symbol | |
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| ID | 6177124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 60721 |
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| End bp | 62091 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641679788 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_001806771 |
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| Protein GI | 172059119 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0324738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCACGC TGATTGTTTC TTTGCCGCCG CGCGAGCCGG CCGTGCCGTT GCAGGAATGG
CAGTGGCCCG AGCTGCCGTT CACGCTCGTG GACAAGGCCG GCCAGGTGCA GCGCGCGGGC
CACGCCGCGC TCGCGCTGCT GCCGCGCGCG AACGAGACGC GGCTGATCGT GGCCGCGCGC
GACGTGCTGC TGCTGGCTGC GACCGTGCCG CCGCTCAAGG GGCCGAAGCT GCGCCAGGCG
CTGCCCAACA TCGTCGAGGA TCAGCTGATC CAGGATCCGC TCGGCTGCCA TATCGCGCTC
GACCCGGTCG CGCTGCCCGA TGGCCGCCGC GTGCTGGCCG TCGTCGACCG CGCGTGGTTC
CGTACGATCT GCGACGCGTT CGCCGCGGCA GGCCATCGGC GCCTGAGCGC GGTACCCGCG
ACGCGCTGCC TGCCGGCGCC GCGCGAGCCG GCGCAAGCGC CGCTCGACGC GCCTGTCGAC
GGTGAGGCGG TCAAGGCCGA CGCGATCACG ATCGCGACCG CCCCGGCTGC CCGCCCGACG
GCCGTGGCCG CGGTGCTCGG GCTGGCAACC ACGGTCGAAC CGGCGCTCGT CGAAGCCGGC
GCGCTGCCGG TCGCGGCCGG TGCGCCGCGT CTAGAACTCG CGATCGCACG TGGCGCGCTC
GGCGAGGGTT TCGCGGCGCC CGCGTCGCGG GCCGCCGGCA CGCTGGCCGC GCTCGCGGGC
GGCGGCGACG TCGAACTGTA CGAACTCGGC GAGCCGGGCG CGGAGCCGCG GCTCGCGTCG
GTCGGCCGCA CCGACGGCCC GCTGCTGCCG GGTGCGCAGC CGCTGCCATT CGACACGTTC
GCGCGGCGTG CACTCGCCGA GCGCTTCGAT CTGTGCCAGT TCGAATTCGA GTCGCAGCCG
TGGCGCTTCG ACCGCGCGAC GATGAAGCGC CTGCGCGTGC CGATCGCCCT CGTCGCGGCA
ACGCTCGGCG TCGCGGTGAT CGGGATGAAC CTGCACTGGT GGAAGCTGTC GCGCGAGCGC
GATGCGCTGT CCGCGCAGAT CACCGAGACG CTGCTGTCCG CCTTCCCGAA GACCACGACG
GTGCTCGATC CGCCCGCGCA GATGCAGCGC CAGCTCGACC AGTTGCGCCT CGCCGCGGGC
GAGCTGTCGC CGAACGACTT CCTCGCGCTG TCGAGCGGGC TGTCGCGTTC GATGGGCGCG
CTGCCGCTCA ACGGAATCGC GTCGCTCGAT TATCACGACC GGCGGCTCGA CGTCGGCTTC
AAGCCGGAGG TCAAGGTCGA CCCCGATTTC CCGCAGCGTC TCGCGCGCAA CGGGCTCGCT
GGCGAAGTCG ACAGCAGCAC CGGCAAATGG ACCATCCGGA GCCGCCCATG A
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| Protein sequence | MSTLIVSLPP REPAVPLQEW QWPELPFTLV DKAGQVQRAG HAALALLPRA NETRLIVAAR
DVLLLAATVP PLKGPKLRQA LPNIVEDQLI QDPLGCHIAL DPVALPDGRR VLAVVDRAWF
RTICDAFAAA GHRRLSAVPA TRCLPAPREP AQAPLDAPVD GEAVKADAIT IATAPAARPT
AVAAVLGLAT TVEPALVEAG ALPVAAGAPR LELAIARGAL GEGFAAPASR AAGTLAALAG
GGDVELYELG EPGAEPRLAS VGRTDGPLLP GAQPLPFDTF ARRALAERFD LCQFEFESQP
WRFDRATMKR LRVPIALVAA TLGVAVIGMN LHWWKLSRER DALSAQITET LLSAFPKTTT
VLDPPAQMQR QLDQLRLAAG ELSPNDFLAL SSGLSRSMGA LPLNGIASLD YHDRRLDVGF
KPEVKVDPDF PQRLARNGLA GEVDSSTGKW TIRSRP
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