| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0046 |
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| Symbol | |
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| ID | 6176749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 54338 |
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| End bp | 55900 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641679781 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001806764 |
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| Protein GI | 172059112 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA CCACGGCATC CGCCGCGCCA CCTGCCGCCG AACCCGCGCC GCTCACCGGC
GGCGCGCTCG CGCTCCTCAC CGTCGGGCTC GCGCTCGGCA CCTTCATGGA AGTGCTCGAC
ACGTCGATCG CGAACGTCGC GGTGCCGACC ATCTCGGGCA GCCTCGGCGT CGCGACGAGC
GAAGGCACGT GGGTGATCTC GTCGTATTCG GTCGCGTCCG CGATCGCGGT GCCGCTGACC
GGCTGGCTCG CACGGCGGGT CGGCGAGGTG CGCCTGTTCA CGCTGTCGGT GCTCGCGTTC
ACGATCGCGT CGGCGCTGTG CGGCCTCGCG TCGAACTTCG AGACGCTGAT CGCGTTCCGG
CTGCTGCAGG GCCTCGTGTC GGGCCCGATG GTGCCGCTGT CGCAGACGAT CCTGATGCGC
AGCTACCCGC CGGCGAAGCG CGGGCTCGCG CTCGGGCTAT GGGCGATGAC GGTGATCGTC
GCGCCGATCT TCGGCCCGTT GCTGGGCGGC TGGATCAGCG ACAACTACAC GTGGCCGTGG
ATCTTCTACA TCAACCTGCC GATCGGCATC TTCTCGGCGG CCTGCGCGTA CTTCCTGCTG
CGCGGCCGCG AAACGAAGAC GAGCCGGCAG CGGATCGACG CGGTCGGCCT CGCGCTGCTC
GTGATCGGCG TGTCGTGCCT GCAGATGATG CTCGACCTCG GCAAGGACCG CGACTGGTTC
AACTCGACCT TCATCGTCGC GCTCGCGCTG ATCGCGGTCG TGTCGCTCGC GTTCATGCTC
GTGTGGGAGG CGACCGAGAA GGAACCGGTG GTCGACCTGT CGCTGTTCAA GGACCGCAAC
TTCGCGCTGG GCGCGATGAT CATCTCGTTC GGCTTCATGG CGTTCTTCGG CTCGGTCGTG
ATCTTCCCGC TGTGGCTGCA GACGGTGATG GGCTACACGG CCGGCAAGGC CGGCCTCGCG
ACCGCGCCGG TCGGCCTGCT CGCGCTCGTG CTGTCGCCGC TGATCGGGCG CAACATGCAC
CGGCTCGATC TGCGGATGGT CGCGAGCTTC GCGTTCATCG TGTTTGCGGG CGTGTCGGTC
TGGAATTCGA CGTTCACGCT CGACGTGCCG TTCAATCACG TGATCCTGCC GCGGCTCGTG
CAGGGGATCG GCGTCGCGTG TTTCTTCGTG CCGATGACGA CGATCACGCT GTCGAGCATT
TCCGACGAGC GGCTCGCGAG CGCATCGGGG CTGTCGAACT TCCTGCGCAC GCTGTCCGGC
GCGATCGGCA CCGCGGCCAG CTCGACGTTC TGGGAAAACG ACGCGATCTA CCACCACGCG
CGGCTGTCGG AATCGGTGAG CGTCTACGCG CAGAATACGA CCGACTATCA GGGCGCGCTC
GCGCAGCTCG GGATCGTCGG GCAGACGGCC AATGCGCAGC TCAACCAGCT CGTCACGCAG
CAGGGCTTCA TGATGGCGAC CAACGACTTC TTCCACCTGT CGGCCGGCGT GTTCATCGCG
CTCGCGGCGC TGGTGTGGAT CACGAAGCCG CGGAAGGGCG CGGGGCCGGC GATGGGGCAT
TGA
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| Protein sequence | MSATTASAAP PAAEPAPLTG GALALLTVGL ALGTFMEVLD TSIANVAVPT ISGSLGVATS
EGTWVISSYS VASAIAVPLT GWLARRVGEV RLFTLSVLAF TIASALCGLA SNFETLIAFR
LLQGLVSGPM VPLSQTILMR SYPPAKRGLA LGLWAMTVIV APIFGPLLGG WISDNYTWPW
IFYINLPIGI FSAACAYFLL RGRETKTSRQ RIDAVGLALL VIGVSCLQMM LDLGKDRDWF
NSTFIVALAL IAVVSLAFML VWEATEKEPV VDLSLFKDRN FALGAMIISF GFMAFFGSVV
IFPLWLQTVM GYTAGKAGLA TAPVGLLALV LSPLIGRNMH RLDLRMVASF AFIVFAGVSV
WNSTFTLDVP FNHVILPRLV QGIGVACFFV PMTTITLSSI SDERLASASG LSNFLRTLSG
AIGTAASSTF WENDAIYHHA RLSESVSVYA QNTTDYQGAL AQLGIVGQTA NAQLNQLVTQ
QGFMMATNDF FHLSAGVFIA LAALVWITKP RKGAGPAMGH
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