Gene BamMC406_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0029 
Symbol 
ID6176784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp38370 
End bp40376 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content68% 
IMG OID641679764 
Productsite-specific DNA-methyltransferase (adenine-specific) 
Protein accessionYP_001806747 
Protein GI172059095 
COG category[L] Replication, recombination and repair 
COG ID[COG2189] Adenine specific DNA methylase Mod 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAC TCGATGCGGA GAGCCCGCAG GCGATGTCGA CGGATTTCAT CGCCGACAAC 
GTCGCGCGCC TGAAGGCGCT GTTCCCCGAA CTCGTGACCG AAGGCCCGGA CGGCGCGTCG
GTCGACGTCG ACGTGCTGAA GGCGCTGGTC GGCGAGCGCA CCGTCGGCGC TGCCGACGAG
CGCTATGGCT TCCACTGGCA CGGCAAGCGC AGCGCGCGCC AGGCCGCGCT CACGCCGTCG
ACGGGCACGT TGCGCCCCTG CCCCGACGAC AGCGTCGCGT GGGACGACAC GCGCCATCTC
GTGATCGAGG GCGACAACCT CGACGTGATG AAGCTGCTGC ACAAGAGCTA CGCGGGCAAG
GTGAAGCTCG TCTACATCGA CCCGCCGTAC AACACCGGCA GCGATTTCGT CTATCCGGAC
GACTTCAGCG ACAGCATCCG CCACTACCTG GCGATGACGG GCCAGACCGA CGGCGGCGTG
AAGCGCAGCA CCAATACCGA GGCGAACGGC CGGTTCCACA CCGACTGGCT GAACATGATG
TATCCGCGCC TGAAGCTCGC GCACGCGCTG CTGTCCGACG AAGGGCTGAT CGCCGTGCAC
ATCGACGAGC ACGAGGTGCA TGCGCTCGTG CTGATGCTGC GCGAGATCTT CGGCGAGGAG
AACGAGCTCG GCGTGGCCGT GTGGGACAAG CGCAATCCGA AGGGCGATGC GCGCGGCGTC
GCGTACCAGC ACGAATCGCT GGTGCTGTTC GCGCGCAACG CGGAGACGCT GCTCGAACAG
GCGCCGCTGA AGCGCCCGAA GCGCAACGCG CAGCGCATGC TCGACGCCGC GCACGACGCG
GTATACCGCA GCGGCAACGC GAAGGACGCG CAGAAGGCGT ACCGCGCGTG GATGAAGGCG
CAGACCAACC TGTCCGGCGG CGAGGTGATG TACGACCGGC TGTCGGCCGA CGGGCGCGTG
TACCGCCTCG TGTCGATGGC ATGGCCGAAC AAGAAGAAGG CGCCGGAAGA GTATTTCACG
CCGCTGATCC ACCCGGTCAC CGGCAAGCCG TGCGCGATGC CGGCCCGCGG CTGGCGCAAT
CCGCCGGCGA CGATGCAGGC GCTGATCGAG CGCGGCCAGA TCGAATTCGG CCCGGATGAA
ACCACGCAGC CGCAGCGGAT CTACTACCTC GACGAGAACA TGTACGAGAA CGTGCCGTCG
GTGCTGCCGT TCGCCGGCTC CGACGACGCG CTGCTGAAGA CGCTCGGCAT CCCGTTCGAC
CAGCCGAAGC CGGTCGATTT CGCGGCGGCC GTGATCGGCT GGTGCACGCG CGGCGACGAC
ATCGTGCTCG ACTGCTTCGC GGGCGCCGGC TCGACCGGCC ACGCGGTGAT GCAGGTGAAC
GCGACCGACG GCGGCGCGCG CCGCTACATC CTCGTGCAGC TGCCCGAGAC GCTCGACCGG
CGCGACAAGA CGCAGCTCGC GGCCGCCGAT TTCTGCGCGA AGCTGAAGAA GCCGACGACG
CTCGCCGAGA TCACGAAGGA ACGCCTGCGC CGCGCCGCGC AGCAGGTCGC GCGCGATTAT
CCGGAAAGCT ATGGCGACCT CGGTTTCCGC GTGTACCGGC TCGACACGAC CAACGTGATC
GAGTGGGATC CGCGCCGCGA CGACTTCGAC CACGCGCTGT TCGCGTCCGT CGAGCACGTG
AAGACCGGCC GCAGCGAGGA CGACCTGCTC GCCGAGCTGA CGCTGAAGCT CGGTCTCGAC
CTGTGCACGC CGGTCGAGCA TCACCAGGTC GCCGGCAAGA CCGTGCATCT GATCGGCCGC
TCGATCGTCG CGTGCTTCGA TGCGCGCATT TCGCGCGACG ACGCGGGCCC GCTCTCGGAC
GGCATCGTCG AGCTGCTCGA CGCGACCGGT GCGACGCGCG ACGTCACGTG CCTGTTCCGC
GACAGCGGCT TCGTCGACGA CGTCGCGAAG CTCAATCTCG CCGCGCTGCT CGAGCAGCAC
GGCGTGAAGC GCGTGCGGAG CCTGTGA
 
Protein sequence
MQKLDAESPQ AMSTDFIADN VARLKALFPE LVTEGPDGAS VDVDVLKALV GERTVGAADE 
RYGFHWHGKR SARQAALTPS TGTLRPCPDD SVAWDDTRHL VIEGDNLDVM KLLHKSYAGK
VKLVYIDPPY NTGSDFVYPD DFSDSIRHYL AMTGQTDGGV KRSTNTEANG RFHTDWLNMM
YPRLKLAHAL LSDEGLIAVH IDEHEVHALV LMLREIFGEE NELGVAVWDK RNPKGDARGV
AYQHESLVLF ARNAETLLEQ APLKRPKRNA QRMLDAAHDA VYRSGNAKDA QKAYRAWMKA
QTNLSGGEVM YDRLSADGRV YRLVSMAWPN KKKAPEEYFT PLIHPVTGKP CAMPARGWRN
PPATMQALIE RGQIEFGPDE TTQPQRIYYL DENMYENVPS VLPFAGSDDA LLKTLGIPFD
QPKPVDFAAA VIGWCTRGDD IVLDCFAGAG STGHAVMQVN ATDGGARRYI LVQLPETLDR
RDKTQLAAAD FCAKLKKPTT LAEITKERLR RAAQQVARDY PESYGDLGFR VYRLDTTNVI
EWDPRRDDFD HALFASVEHV KTGRSEDDLL AELTLKLGLD LCTPVEHHQV AGKTVHLIGR
SIVACFDARI SRDDAGPLSD GIVELLDATG ATRDVTCLFR DSGFVDDVAK LNLAALLEQH
GVKRVRSL