| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0028 |
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| Symbol | |
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| ID | 6176112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 35356 |
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| End bp | 38370 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641679763 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_001806746 |
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| Protein GI | 172059094 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGC ATTTCGAAGC GGATCTCGAC TACCAGCGCG AGGCGATCGA CGCCGTCTGC
GACCTGTTTC GCGGCCAGGA ATCGTATCGC GGCGACTTCA GCGTGCTCGC GAACGCCGCG
CCCGGCACGA CGGCCGCCGC GCAAGGTTCG CTCGGCTTCG CGGTGTCGGA GCAAGGCGTC
GGCAACCGGC TGTCGCTGAC CGACGACGCG CTCGCGCGCA ATCTCGCCGA CGTGCAGCTG
CGCGGCGGGC TGCCGGCGTC CGGCCTGCCC GGCTCGCGCG ACTTCACCGT CGAGATGGAG
ACCGGCACCG GCAAGACCTA CGTGTACCTG CGCACGATCT TCGAGCTGAA CCGCCGCTAC
GGCTTCACGA AGTTCGTGAT CGTCGTGCCG TCGATCGCGA TCAAGGAAGG CGTGCACAAG
ACGCTGTCGA TCACCGAGGA CCATTTCCGC GCGCTGTATG CGGGCGTGCC GTACGACTAC
TTCCTGTACG ACTCCGCGAA GCTCGGCCAG GTGCGCCACT TCGCGGCGAG CGCGGCGATC
CAGATCATGG TGATGACGGT TGCCGCGATC AACAAGAAGG AGATCAACAA CCTCTACAAG
GACAGCGAGA AGACGGGCGG CGAGAAGCCG ATCGACCTGA TCCGCGCGAC GCGGCCGATC
GTGATCGTCG ACGAGCCGCA GAGCGTCGAC GGCGGGCTCG AGGGGCGCGG GCGCGAAGCG
CTCGCCGCGA TGGCGCCGCT CTGCACGCTG CGCTATTCGG CGACGCACGT CGACCGTCAT
CACATGGTGT ACCGGCTCGA CGCGGTCGAT GCGTACGAGC GCAAGCTCGT CAAGCAGATC
GAGATCGCGT CGGCGATAGT CGAGGATGCG CACAACAAGC CGTACGTGCG GCTCGTCGGC
GTGTCGAACC GGCGCGGCGC GATCAGCGCG CGCATCGAGC TGGACGTCGC GACCGCGGCC
GGCGTGAAGC GCCAGATCGT GTCGGCGACC GACGGCGACG ATCTCGAGCG CCTGACGAAG
CGCGCACTGT ATGCGGGGCT GCGCGTCGGC GAAGTCCATG CGGTGAAGGG CGCCGAGTAC
GTCGAGCTGC GCCATCCGGA AGGCGAGGCG TTCCTGTCGC TCGGCGAGGC GTTCGGCGAC
ATCGACACGC TCGCCGTGCA GCGCGAGATG ATCCGCCGCA CGATCCGCGA GCATCTCGAC
AAGGAATTGC GTCTGGCCGA GCGCGGCGTG AAGGTGCTGT CGCTGTTCTT CGTCGATTCG
GTCGAACGCT ATCGCCGCTA CGACGAGAAC GGGATGCCCG TGAAGGGCGA CTACGCGCTG
ATCTTCGAAG AGGAATATGC GCGCGCGGCC CGCGTGCCGG CTTACCGTGC GTTGTTCGAC
GGCGTCGACG TCGCGCTCGA GGTCGAGCGC GCGCACAACG GCTACTTCTC GATCGACCGC
AAGGGTGGCT GGACCGACAC GAGCGAGAGC AGCGCCGCCG CACGCGAGAA CGCGGAGCGC
GCGTACGGCC TCATCATGCG CGAGAAGGAA GCGCTGCTGT CGTTCGACAC GCCGCTGAAG
TTCATCTTCT CGCACTCGGC GCTGAAGGAA GGCTGGGACA ACCCGAACGT GTTCCAGATC
TGCACGCTGC GCGACATCCA GACCGAGCGC GAGCGTCGCC AGACGCTCGG CCGCGGGCTG
CGCCTCGCCG TCGACCAGGA CGGCGAGCGC GTGCGCGACC CGGGCGTCAA CACGCTGACC
GTGATCGCGA CCGAGCGCTA CGAGTCGTTT GCCGAGAACC TGCAAAAGGA AATCGAGGCC
GATACGGGCA TCCGCTTCGG GATCGTCGAG GAACACCAGT TCGCGGCGCT GCCGGTGCAG
GAAGGCGACG GGCCCGCGCA TGCGCTCGGC ATCGAGCTGT CGCGCGTGCT GTGGGCGCAT
CTGCGCGAAC AGGGCTACGT CGACGCGCAG GGCAAAGTGC TCGACCGGCT GAAGGACGCG
CTGCGCCAGA GCGCACTCGT GCTGCCCGAA GCGTTCGAGA CGCTGCGCGC GCCGATCGTC
GCGATGCTGC GCAAGCTGTC GGGCCGCTTC GCCGTGCGCA ATGCGGACGA GCGGCGCGCG
ATCGCGTTGC GGCGCGACGC GTCGGGCAAG GCTGTCGTGT TCGGCGACGA CTTCCGCGCG
CTGTGGGACC GTATCCGCCA CCGCACCGTG TACAGCGTCG AGTTCGACAA CGCGAAGCTC
GTGCGCGACT GCACGGCCGC GCTGCGCGAC GCGCCGGACA TCGCGCGTGC CCGGCTGCAG
TGGCGCAAGG CCGAGATCGA CATCGGCAAG GCCGGCATCG AGGCGGTCGA GGTGGCCGGC
GCGGGCACGG TGCTGATCGA CGAAGGCGAG CTGCCGCTGC CCGACCTGCT CACCGAGCTG
CAGGACCGCA CGCAGCTCAC GCGCCGCTCG CTCGCGACGA TCCTCGCCGA CAGCGGCCGG
CTCGACGATT TCCGCGTGAA TCCGCAGCAG TTCATCGCGC TGGCCGCCGA TGCGATCAAC
CGCTGCAAGC GGCTCGCGCT GGTCGCGGGC ATCGCGTACC GCAGGCTCGG CGAACGCAAC
GTGCATGCGC TCGAATCGTT CGAGAGCGAG GCGCTGACCG GCTATCTGCG CAACCTGCGT
CCCGATGCGC GCAAGTCGAT CCACGAGGCC GTCGTGTGCG AGACCGACGC GGAGCGTGCG
TTCGCCGATG CGCTGGAAGC GCACGACGGC GTGAAGCTGT ACGCGAAGCT GCCCGCGTGG
TTCCGCGTGC CGACGCCGCT CGGCAGCTAT CACCCCGACT GGGCGGTGCT CGCGGAGCAG
GATGGCGGCG AGCGGCTGTA TTTCGTCGTC GATACGCCGA ATGCCGATGG CGACGTGACG
ACCGAGCACG AGCGCGCGAA GCTCGCGTGC GGTGAAGCGC ATTTCCGTGC GCTGGTGGAC
GGGGAAGATG CCGCGCGATT CGTGCGCGTC AGGCAGGCGG AGGCGTTGTT CGAGCCTGCT
GTGTTGCGGC TTTGA
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| Protein sequence | MRLHFEADLD YQREAIDAVC DLFRGQESYR GDFSVLANAA PGTTAAAQGS LGFAVSEQGV
GNRLSLTDDA LARNLADVQL RGGLPASGLP GSRDFTVEME TGTGKTYVYL RTIFELNRRY
GFTKFVIVVP SIAIKEGVHK TLSITEDHFR ALYAGVPYDY FLYDSAKLGQ VRHFAASAAI
QIMVMTVAAI NKKEINNLYK DSEKTGGEKP IDLIRATRPI VIVDEPQSVD GGLEGRGREA
LAAMAPLCTL RYSATHVDRH HMVYRLDAVD AYERKLVKQI EIASAIVEDA HNKPYVRLVG
VSNRRGAISA RIELDVATAA GVKRQIVSAT DGDDLERLTK RALYAGLRVG EVHAVKGAEY
VELRHPEGEA FLSLGEAFGD IDTLAVQREM IRRTIREHLD KELRLAERGV KVLSLFFVDS
VERYRRYDEN GMPVKGDYAL IFEEEYARAA RVPAYRALFD GVDVALEVER AHNGYFSIDR
KGGWTDTSES SAAARENAER AYGLIMREKE ALLSFDTPLK FIFSHSALKE GWDNPNVFQI
CTLRDIQTER ERRQTLGRGL RLAVDQDGER VRDPGVNTLT VIATERYESF AENLQKEIEA
DTGIRFGIVE EHQFAALPVQ EGDGPAHALG IELSRVLWAH LREQGYVDAQ GKVLDRLKDA
LRQSALVLPE AFETLRAPIV AMLRKLSGRF AVRNADERRA IALRRDASGK AVVFGDDFRA
LWDRIRHRTV YSVEFDNAKL VRDCTAALRD APDIARARLQ WRKAEIDIGK AGIEAVEVAG
AGTVLIDEGE LPLPDLLTEL QDRTQLTRRS LATILADSGR LDDFRVNPQQ FIALAADAIN
RCKRLALVAG IAYRRLGERN VHALESFESE ALTGYLRNLR PDARKSIHEA VVCETDAERA
FADALEAHDG VKLYAKLPAW FRVPTPLGSY HPDWAVLAEQ DGGERLYFVV DTPNADGDVT
TEHERAKLAC GEAHFRALVD GEDAARFVRV RQAEALFEPA VLRL
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