Gene BamMC406_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0022 
Symbol 
ID6176583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp31254 
End bp32480 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content67% 
IMG OID641679757 
Producthypothetical protein 
Protein accessionYP_001806740 
Protein GI172059088 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.45707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC TTGCATCCCA GCTTCAGCGC CGTTATCAGG ACGTGCGCGC CCATAGCATC 
GCGTTGACCG CGACGCTATC CGCCGAAGAT CAGGCCGTGC AGTCGATGCC CGACGCGAGT
CCGGTGAAAT GGCATCTCGC GCATACGACC TGGTTCTTCG AAACCGTCGT GCTGATGCGC
CGCGTGCCCG GCTACGCGCC GTTCGACGCG GCCTTCCAGT TCCTCTTCAA TTCCTATTAC
GAAGCGCTCG GCCCGCGCCA CCCGCGGCCG CAGCGCGGGC TGCTCACGCG TCCGTCGCTC
GATGACGTGC ATGCGTACCG GCAGTACGTC GACGAAGCGA TGCTGCGCGC GCTCGATGAT
GCCGATCCGG CGTTGCTCGC CGCGATCGCG CCCGAGATCG AGCTGGGTCT GCATCACGAA
CAGCAGCATC AGGAGCTGAT CGTCACGGAC ATGCTGCATG CGTTCTCGTG CAACCCGCTC
AAGCCTGCCT TCCGGCCACG CAACGGCGCC GCCACGCACG CGTTGGCCGC GGGCGACGCC
GGCCCGTTGC GCTGGCTGCA TCAGCCAGGC GGGCTGGTCG AGATCGGCCA CGACGGCGAC
GCGTTCTCGT TCGACAACGA ACGGCCGCGT CATACGGCGC TCGTGCGACC GTGCGAGATC
GCGAACCGTC TCGTGACGAA TGCGGAATTC GCGGCCTTCA TCGCCGACGG CGGCTATGAA
CGCCCCGAAT ACTGGCTGTC CGACGGCTGG GCAACGGTGC AGCGGGAAGG GTGGTCGGCG
CCGCCGTACT GGATTCGCGA CGACGACGGC GACGCCAAAA CCGTCCATGC ATGGCGTGCG
TTCGGCCTGC ACGGCGTGGA GCCGCTCGCA CCCGATGCAC CCGTGTGTCA TGTGAGCTTT
TACGAAGCGG CCGCCTACGC GGAATGGGTC GGCGCACGCC TGCCGACGGA GTTCGAATGG
GAAGCCGCGT TCGGCACGGA CGGCATGCAG CAGATGCTCG GGCACGTGTG GCAGTGGACG
CGTTCGTCCT ACGAGCCGTA TCCGGGCTTT CGGCCGCTCG CCGGGGTGGC GGCCGAATAC
AACGGCAAGT TCATGGTCGG CCAGCAGGTC CTGCGCGGCA GCAGCATCGC GACGCCGCCG
GGGCACGAAC GGCCGACGTA CCGCAATTTC TTTCCGCCGG CCGCGCGCTG GCAATTCACG
GGAGTGCGAC TTGCGCGAGA CGTCTGA
 
Protein sequence
MSLLASQLQR RYQDVRAHSI ALTATLSAED QAVQSMPDAS PVKWHLAHTT WFFETVVLMR 
RVPGYAPFDA AFQFLFNSYY EALGPRHPRP QRGLLTRPSL DDVHAYRQYV DEAMLRALDD
ADPALLAAIA PEIELGLHHE QQHQELIVTD MLHAFSCNPL KPAFRPRNGA ATHALAAGDA
GPLRWLHQPG GLVEIGHDGD AFSFDNERPR HTALVRPCEI ANRLVTNAEF AAFIADGGYE
RPEYWLSDGW ATVQREGWSA PPYWIRDDDG DAKTVHAWRA FGLHGVEPLA PDAPVCHVSF
YEAAAYAEWV GARLPTEFEW EAAFGTDGMQ QMLGHVWQWT RSSYEPYPGF RPLAGVAAEY
NGKFMVGQQV LRGSSIATPP GHERPTYRNF FPPAARWQFT GVRLARDV