| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0017 |
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| Symbol | |
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| ID | 6176524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 26355 |
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| End bp | 27116 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641679751 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001806735 |
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| Protein GI | 172059083 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00133889 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACC TCCGTCCCGA CGAACACGAT CTCCAGGCCT ATGTCGACGG CCAGCTCGAC
GACGATGCGC GTGCCGCGGT CGAGCGATAT CTCGCGCTGC ATCCGGAGAG TGCGGAACAG
GTGAAGCGCT GGCAGCAGGA TGCGCAGCGG TTGCGGGCCG CGCTCGAGAG TGTGCGGATG
CCGGGTGAGA ACCCTGAACT CGATCCGGCG GCGATTCGTG CGCGGCGTGC AGAGCGCTCG
CGGATGCGGT TCGCGATGGC GGCTTCGTTC GTGTTCTGTA TCGGGCTCGG GACGTTTGGC
GGGTGGCAGG CGCGCGGGTG GAACGCGGCG CCGCCGATCG CGCCAATGAG CGATGCGCTC
GAGGCTTACC GGATGATGGT GGTCGACCAG GTCGCGAAGG TGGATTTCCG GCCGACGAGT
GCGGGCGATT TGCAGGGGTG GCTCACCAGA CGCGTGGGCG CTTCGGCGAA GCTGCCGGAT
TTGAGTGCTG CGGGGTTCAA ACCGGTTGGC GGGCGGTTGT TTACGACGGA CAGCGGGGCC
ACGGCCGCGA TGGTGCTCTA TGAGGACAAC GCCGGACGGA CGCTCAGCTT CTATCTCCGG
CCAGCGGAAT CGAAACATCG GCTGCTGCCG GCGGGGCAAC GCGTGGATGG GGCGTTGCTG
GCGCGGTATG GGTCGGCGAA CGGGATTAAC TTTGCGGTGG TCGGGCCGGC GGTCAATCTG
GGCGAACAAG CCGTTGTGCG GGCGCTCGAT CGGCAGATTT GA
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| Protein sequence | MNNLRPDEHD LQAYVDGQLD DDARAAVERY LALHPESAEQ VKRWQQDAQR LRAALESVRM
PGENPELDPA AIRARRAERS RMRFAMAASF VFCIGLGTFG GWQARGWNAA PPIAPMSDAL
EAYRMMVVDQ VAKVDFRPTS AGDLQGWLTR RVGASAKLPD LSAAGFKPVG GRLFTTDSGA
TAAMVLYEDN AGRTLSFYLR PAESKHRLLP AGQRVDGALL ARYGSANGIN FAVVGPAVNL
GEQAVVRALD RQI
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