| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0003 |
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| Symbol | gyrB |
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| ID | 6176988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3361 |
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| End bp | 5835 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641679735 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_001806722 |
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| Protein GI | 172059070 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.180708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.538686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAC AGCACAATTC GCAACCCGAT AACAGCAGCT ACGGCGCTTC GTCGATCCAG
ATCCTCGAAG GTCTGGAAGC GGTGCGCAAG CGCCCCGGGA TGTACATCGG CGACACGTCG
GATGGCACCG GTCTGCACCA CCTCGTGTTC GAGGTGCTCG ACAACTCGAT CGACGAAGCG
CTGGCCGGGT ACTGCAACGA CATCCACGTG ACGATTCACG CCGACAACTC GATTTCCGTG
ACCGACAACG GCCGCGGGAT TCCGACCGAC GTGAAGATGA ACGACAAGCA CGAGCCGAAG
CGCAGCGCCG CCGAGATCGT AATGACCGAG CTGCACGCCG GCGGCAAGTT CGACCAGAAC
AGCTACAAGG TGTCCGGCGG CCTGCACGGC GTGGGCGTGT CGTGCGTGAA CGCGCTGTCG
AGCTGGCTGC GCCTCACCGT GCGTCGCAAC GGCAAGAAGC ATTTCATGGA GTTCCATCGC
GGCGTTGCGC AGGAGCGCGT GCTCGAGAAG GTGGACGGCG TGGAAGTGTC GCCGATGCTG
GTGACCGGCG ACACCGAGAA CCGCGGTACC GAAGTGCACT TCATGGCCGA TCCGACGATC
TTCGGCACGG TTGAATATCA CTACGACATC CTCGCGAAAC GGATGCGCGA GCTCTCGTTC
CTGAACAACG GCGTGCGGAT TCGTCTCACC GACCTGCGTT CAGGCAAGGA AGACGATTTC
GCGTTCGCCG GCGGTGTGAA GGGCTTCGTC GAGTACATCA ACAAGACGAA GACCAACCTG
CACCCGACGA TTTTCCACGC CAACGGCGAG AAGGATGGCG TGGGCGTCGA AGTGGCGATG
CAGTGGAACG ACAGCTACAA CGAGAACGTG CTGTGCTTCA CGAACAACAT TCCGCAGCGC
GACGGCGGCA CGCACCTGAC CGGCCTGCGG GCCGCGATGA CGCGCGTCAT CAACAAGTAC
ATCACCGACA ACGAAATCGC GAAGAAAGCG AAGGTCGAGA CGACCGGCGA CGACATGCGT
GAAGGGTTGT CGTGCGTGCT TTCCGTGAAG GTGCCGGAGC CGAAGTTCAG CTCGCAGACG
AAGGACAAGC TGGTGTCGTC CGAAGTGCGG GCGCCGGTTG AAGAAGTCGT CGCGAAGGCG
CTGGAAGAGT TCCTGCTCGA AACGCCGCTC GACGCGAAGA TCATCTGCGG GAAGATCGTC
GAAGCCGCGC GTGCGCGCGA TGCTGCTCGG AAGGCGCGTG AAATGACGCG CCGCAAGGGC
GTGCTCGACG GCGTCGGCCT GCCGGGCAAG CTCGCGGACT GCCAGGAGAA AGACCCGGCG
AAGTGCGAAA TCTACATCGT CGAGGGCGAC TCGGCAGGCG GGTCGGCGAA GCAAGGGCGT
GACCGGAAGT TCCAGGCGAT CCTGCCGCTG CGCGGCAAGG TGCTGAACGT CGAGAAGGCG
CGCTACGACA AGCTGCTGTC GTCGGAGCAG ATCGTCACGC TCGTGACCGC GCTTGGGTGC
GGGATCGGCA AGGACGATTA CAACCTCGAC AAGCTGCGCT ATCACCGCAT CATCATCATG
ACCGACGCGG ACGTCGACGG TGCGCACATC CGGACGCTGC TGCTCACGTT CCTCTATCGC
CAGATGCCGG ACATGATCGA GCGCGGGTAT GTGTATATCG CGCAGCCGCC GCTTTACAAG
ATCAAGGCGG GCAAGGACGA GCGGTATCTG AAGGACGATA CGGAGCTGAA CGCGCATATG
CTGCGGTTGG CGCTGCAAGG GTCGGAACTG GTGCCTGGCG AGAATGCGGC GGCGATTTCC
GGCGATGCGC TCGGGGAGTT GGCGCGGTCG TATCTGCTGT CGAAGAGCGT GATCGAGCGG
TTGAGCCGGC TGTATGATCC GGCCGCGCTT GAAGCGGTCA TGGACGGGGT GGCGATCGAT
CTCTCCAATG AGGCTTCGAC GGAGGCTTCG GCGAAGGCGC TGCACGCCGC GCTGCATGAT
GATGCGCTGA AGAACGAAGT TCGTGTGGTG CCTTCGTATG ACCCGGTTCG TGAACAACGG
TCGCTGCATA TCGAGCGGAC GCATCACGGG AACGTGCGGG TTTCGGTCAT TGACCAGGAG
TTCCAGCACA CGGCTGATTA TCAGCAGCTC GTGGCTACCG CGAATACGTT CACGGGGCTT
ATTGGGGAAG GTGCTGTTAT CAAGCGTGGT GAGCGCAGCA TGGCTGTGAG CGACTTCAAG
AGCGCGATGA AGTGGCTGCT GGCGGATGCG GAACGCAACG TCTCCAAACA ACGCTATAAG
GGTCTCGGCG AGATGAACCC CGAGCAGCTG TGGGAAACGA CGATGGATCC GGCAGTGCGG
CGTCTGCTGC GTGTGCAGAT CGAAGACGCA ATCGCGGCGG ATGGGATCTT TACTACCCTC
ATGGGCGATG ATGTCGAGCC GCGGCGGGCG TTTATCGAGT CGAATGCGTT GCGGGCGGGG
AATATTGACG TTTGA
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| Protein sequence | MSEQHNSQPD NSSYGASSIQ ILEGLEAVRK RPGMYIGDTS DGTGLHHLVF EVLDNSIDEA
LAGYCNDIHV TIHADNSISV TDNGRGIPTD VKMNDKHEPK RSAAEIVMTE LHAGGKFDQN
SYKVSGGLHG VGVSCVNALS SWLRLTVRRN GKKHFMEFHR GVAQERVLEK VDGVEVSPML
VTGDTENRGT EVHFMADPTI FGTVEYHYDI LAKRMRELSF LNNGVRIRLT DLRSGKEDDF
AFAGGVKGFV EYINKTKTNL HPTIFHANGE KDGVGVEVAM QWNDSYNENV LCFTNNIPQR
DGGTHLTGLR AAMTRVINKY ITDNEIAKKA KVETTGDDMR EGLSCVLSVK VPEPKFSSQT
KDKLVSSEVR APVEEVVAKA LEEFLLETPL DAKIICGKIV EAARARDAAR KAREMTRRKG
VLDGVGLPGK LADCQEKDPA KCEIYIVEGD SAGGSAKQGR DRKFQAILPL RGKVLNVEKA
RYDKLLSSEQ IVTLVTALGC GIGKDDYNLD KLRYHRIIIM TDADVDGAHI RTLLLTFLYR
QMPDMIERGY VYIAQPPLYK IKAGKDERYL KDDTELNAHM LRLALQGSEL VPGENAAAIS
GDALGELARS YLLSKSVIER LSRLYDPAAL EAVMDGVAID LSNEASTEAS AKALHAALHD
DALKNEVRVV PSYDPVREQR SLHIERTHHG NVRVSVIDQE FQHTADYQQL VATANTFTGL
IGEGAVIKRG ERSMAVSDFK SAMKWLLADA ERNVSKQRYK GLGEMNPEQL WETTMDPAVR
RLLRVQIEDA IAADGIFTTL MGDDVEPRRA FIESNALRAG NIDV
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