| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0002 |
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| Symbol | |
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| ID | 6176574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2048 |
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| End bp | 3154 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641679734 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_001806721 |
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| Protein GI | 172059069 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.011531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.38726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGG TCAAGACCGA ACGAGACACA CTCCTCAGGC CGCTGCAAAC GGTCAGCGGC
ATCGTCGAAC GCCGCCATAC GTTGCCGATC CTCGCCAACC TGCTGATCAC CAAGAACGGC
CCGGACGTTT CTTTCCTGTC GACCGACCTG GAGCTGCAGA TCACCACGCG CGCCGATTTC
GGCGTCGGCG GCGACCAGGT GGCCACCACC GTCGCGGCCC GCAAGCTGCT CGACATCCTG
CGCGCGATGC CTGACGGCCA GGTCACGCTG TCGCTCGCCG ACAAGCGCCT CACCGTTCAA
TCGGGCAAGA GCCGCTTCGC ACTGCAGACG CTCGCGGCCG ACGAGTTCCC GACCGTCGCG
CAGGCGAAGG ATTTCGGCGC GACGCTGACC GTCCCGCAGA AGTCGTTCCG CCAGTTACTC
GGCATGGTGC ACTTCGCGAT GGCGCAGCAG GACATCCGCT ACTACCTGAA CGGCATGCTG
CTCGTCGTCG ACGGCGACCA GCTGATGGCC GTGGCCACCG ACGGCCACCG CCTCGCGTTC
TCGTCGATGA AGCTCGAAGG CGGCACCTTC GGCCGCCAGG AAGTGATCGT GCCGCGCAAG
ACGATTCTCG AGCTGCAGCG CCTGCTCGAA GATATCGACG ACACCGTCAC CATCGACATC
GCGCAAACCC AGGCCAAGTT CACGTTCGGC CAGGTCGAGC TCGTGTCGAA GCTGGTCGAG
GGCAAGTTCC CCGACTTCCA GCGCGTGATC CCGAAGGCGC ACAAGAACAC GTTCGAGATC
GGCCGTGAAG AGCTGCAGCG TTCGCTGCAA CGCGCGGCGA TTTTGACGTC CGACAAATTC
AAGGGCGTGC GCTGCATCAT CGCGCCGGGC CAGCTGAAGA TCATGTCGAC CAACGCCGAT
CAGGAAGAGG CGCAGGAAGA ACTGGAAATC GCGTACCAGG GCGATACCGT CGACATCGGC
TTCAACGTCA CGTATCTGCT CGACGTGCTC GCGAACCTGA AGGTCGACAC CGTACAGGTG
AGCCTCGGCG ACGCCAGCTC GAGCGCGCTG ATCACCGTGC CCGAGAACGA AGAATTCAAG
TATGTCGTGA TGCCGATGCG CATCTGA
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| Protein sequence | MQLVKTERDT LLRPLQTVSG IVERRHTLPI LANLLITKNG PDVSFLSTDL ELQITTRADF
GVGGDQVATT VAARKLLDIL RAMPDGQVTL SLADKRLTVQ SGKSRFALQT LAADEFPTVA
QAKDFGATLT VPQKSFRQLL GMVHFAMAQQ DIRYYLNGML LVVDGDQLMA VATDGHRLAF
SSMKLEGGTF GRQEVIVPRK TILELQRLLE DIDDTVTIDI AQTQAKFTFG QVELVSKLVE
GKFPDFQRVI PKAHKNTFEI GREELQRSLQ RAAILTSDKF KGVRCIIAPG QLKIMSTNAD
QEEAQEELEI AYQGDTVDIG FNVTYLLDVL ANLKVDTVQV SLGDASSSAL ITVPENEEFK
YVVMPMRI
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