| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1773 |
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| Symbol | |
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| ID | 6183763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1543345 |
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| End bp | 1545639 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672271 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001798440 |
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| Protein GI | 171464327 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.866376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCTA TAACAACCCT GCTGGATTCA AGCTTTTTTA CATCACAAGC TTGGAACAAA
AAAGCAATAC CAATCACGAT TGGACTGATT GGTGTATTTG CCTTGATGCT CCTGGTCTTA
TTGGCCATCG CCTCATCTAA TACGGAATTT TTTGATAACT ATTTTATTTG GTTGTATGCT
GCCAATGTGG TGATTGGTCT TTGTCTAACC TTGGTTATTT TGACTCTAGT GATTGTGATA
GCGGTTCGCT GGTATCGCGG TCACTTTGGA ACGCGCTTAA TTGCCAAGCT AGCGATGATT
TTTGCTCTAG TCGGAATCGT TCCGGGCTTA ATTTTGTACG GCGTCTCTTT GCAGTTTGTG
TCGCGCAGTA TTGAAACCTG GTTTGATGTG AAGGTTGAAT CAGCGCTGAA TTCAGGTCTG
GAGTTGGGGC GCGTAACTCT GCGAGTTGCC CAAGAAGAAA TTTTGGGCGA AGGCGATTTT
ATTGCCGAAC AAATTGTGCA GATTCCTTCG GGCGCTACAG CAGATCAAGT TGGCGCAACG
ATTATGAAAA TTCGCAATCA ATTTGGTATT CAAGAGGTCA GTCTCTTTAA TATGCAGCGC
AATTTAATTT TAACTAGCGA GTTAAAGCCT AAAAAATACT TTCCTGCGCC AAGTGCTGAT
GTAGTTGCTG AGGCATTTAA AAAGAGGGGA ATTACTTTTT TAGATCAAAT CGAGATGGAA
GGTGGCCAGC GTGGCTACCG CATCAGGGCA ATCGTCCCCA TTGTTCGCAA AAAAACTGGC
CATAGCAAAG ACGTGGAGGA CAAATATTTT CTTCAGCTTG TGCGCTATAT TCCAACCCCA
TTGGCAAAGA ATATTTTTGC GGTTGAATCC GCCTTTAGCG AATATCAAGA GAAGTCGCTA
GGTCGGACAG GCTTGCGCAA GATGTTTGTA GGCACCCTGA CTCTTACTCT ATTCTTTGCG
GAATTTGTAG CAATTGCTTT GGCACTGATG TTGGGTAGGC AGCTCGCTCG CCCCCTCCTA
ATGCTTTTGA GGGGGACACA AGCAGTTGCG CAGGGCGATC TATCACCCAA ACCCGAGCTA
GATACTGGTG ATGAGCTTGG AATGCTTACA CGGCAATTTA ATGTCATGAC AAGACAGTTG
GCCGACACTC GCACTTCTTT GCAGGAATCC AAGGCATTCT TGGAGCGAGT GTTAGGAAGT
CTCACAGCGG GCGTGTGTAT TTTTGACAAA AACTACAACG TGGTTTCTAG TAATGCGGGA
GCAGACCGAA TTTTTGGCCA AGATCTCACG CAGCTTGATG GAAGACCATT GAGCAGTAGC
CCAGCCCTGC AGGAGTTTGA AGACGCCATT AAGGAAGGTT TTGCCACCAT GAAGCTTGCT
GTTGTTGGTG AGGGTGCCCA GGAGCAAAAG CCTGCTCAGT CGAATGCCCC TGTGTGGCAA
AAACAAATTC AGCTGCATAG CACCAATGAG TTTGCAAATG AATTAGGCGT CACTCTATTT
GTTAGGGGCA CAGAGTTGAC TGGTGATTTG CGCATGGTTG TTTTTGATGA CATTACCGAT
GTAGTAAGTG CACAAAGATC GATTGCCTGG AGTGAGGTAG CGAGACGTCT TGCCCATGAG
ATTAAGAATC CCTTAACGCC AATTCAGCTT TCCGCCGAAA GGTTGCAACA TAAGCTTGCT
GGTAAGTTGA GTCCGGAACA AGAGGAAATG ATTAATCGCA GTACGGAAAC CATTATTGGC
CAGGTGCAAG CCATGAAAGA AATGGTGAAT GATTTTAGGG ATTTTGCGAA AACGCCAACC
CCCCAATTAA AACCAGTTTC TATCAATACG CTTACTTCAG AAATTTTGGG TCTTTATGAA
GGCAGTCCGC TGAAAACAAA GTTGGATCCA AATTGTCCGG ACGTCTTGGG CGACTCCACG
CAATTAAGGC AGGTTATCCA CAACCTTTTG CAAAACGCAC AAGACGCCAC TCTGGAGGGC
CCTAATCCTG GTAGCTCAGT TGAGGTAAAA ACAGAATTGG TGCCTTATGG CGAGCACAAT
GGCGTGGCTC AAAATGCGGT GCGACTGACA ATAAGTGATT GTGGTGTTGG ATTTTCAGCT
AAGATATTGG CAAGGGCTTT TGAACCGTAT GTAACAACAA AGAGTAAAGG TACGGGATTG
GGTTTAGCTG TAGTGAAAAA AATCATTGAT GATCACTCTG CAAAAATTGA AATTCGGAAC
CGTATGCAGG GCGATGAAGT GGTTGGTGCG CAAATATCAA TTTTGTTTAT GAATCTAGCA
AAAGAGGCAG TCTAA
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| Protein sequence | MRSITTLLDS SFFTSQAWNK KAIPITIGLI GVFALMLLVL LAIASSNTEF FDNYFIWLYA
ANVVIGLCLT LVILTLVIVI AVRWYRGHFG TRLIAKLAMI FALVGIVPGL ILYGVSLQFV
SRSIETWFDV KVESALNSGL ELGRVTLRVA QEEILGEGDF IAEQIVQIPS GATADQVGAT
IMKIRNQFGI QEVSLFNMQR NLILTSELKP KKYFPAPSAD VVAEAFKKRG ITFLDQIEME
GGQRGYRIRA IVPIVRKKTG HSKDVEDKYF LQLVRYIPTP LAKNIFAVES AFSEYQEKSL
GRTGLRKMFV GTLTLTLFFA EFVAIALALM LGRQLARPLL MLLRGTQAVA QGDLSPKPEL
DTGDELGMLT RQFNVMTRQL ADTRTSLQES KAFLERVLGS LTAGVCIFDK NYNVVSSNAG
ADRIFGQDLT QLDGRPLSSS PALQEFEDAI KEGFATMKLA VVGEGAQEQK PAQSNAPVWQ
KQIQLHSTNE FANELGVTLF VRGTELTGDL RMVVFDDITD VVSAQRSIAW SEVARRLAHE
IKNPLTPIQL SAERLQHKLA GKLSPEQEEM INRSTETIIG QVQAMKEMVN DFRDFAKTPT
PQLKPVSINT LTSEILGLYE GSPLKTKLDP NCPDVLGDST QLRQVIHNLL QNAQDATLEG
PNPGSSVEVK TELVPYGEHN GVAQNAVRLT ISDCGVGFSA KILARAFEPY VTTKSKGTGL
GLAVVKKIID DHSAKIEIRN RMQGDEVVGA QISILFMNLA KEAV
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