Gene Pnec_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1743 
Symbol 
ID6183313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1526959 
End bp1527279 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content42% 
IMG OID641672246 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001798416 
Protein GI171464303 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCTG ACATCAATAT CTATAAGGAG CTTCATTTGA ACAAAGCCGA ACTAATCGCA 
GCGATTGCTG ACGATGCGGA GATTTCTAAA GCCAAAGCTG AATTCGCATT GAATTCAGCT
ATCGAGAACA TCATCAAAGC TGTTACTAAA GGTGACTCAG TACAACTGAT CGGCTTTGGT
ACATTTGCTT CTAGCAAACG TGCTGCACGT ATGGGTCGCA ACCCAAAAAC TGGCGAGCCA
CTCAAAATCG CTGCTGCGAA AACTGTTAAG TTTTCTGCTG GTAAAGCATT TAAAGATTCA
GTTAACAAGC GTAAGAAGTA A
 
Protein sequence
MYADINIYKE LHLNKAELIA AIADDAEISK AKAEFALNSA IENIIKAVTK GDSVQLIGFG 
TFASSKRAAR MGRNPKTGEP LKIAAAKTVK FSAGKAFKDS VNKRKK