| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1742 |
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| Symbol | |
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| ID | 6183555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1525724 |
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| End bp | 1526875 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641672245 |
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| Product | rod shape-determining protein RodA |
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| Protein accession | YP_001798415 |
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| Protein GI | 171464302 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAAGA GCCCCTTAAC CAAAGTCAAA AAACTTTTCT TTGGTATTTT TTCTGAATTA
GATCGCCAGC TAGGCCTTAT TCTGCTTAGC TTAGCGGCTG TTGGATTTTT TACATTCTTA
TCCGCTAGTC AAAATACTCC TGTACAAATT GCAGATGAGT TTCGTAATCT CGTGCTCTCT
TTTGTGGTGA TGTGGATTGT CTCGCGCATT CCACCAAAGT GGCTGGAAAT GGGTGCGGTT
TGGATTTATG GCTTTGGCAT TGCCCTTCTC ATTGCAGTGG CTGCATTTGG ATTAATTAAA
AAGGGTGCGC GTCGCTGGCT CAATATTGGA GTTGTAATTC AGCCATCAGA AATTATGAAG
ATCGCAATGC CATTGATGCT TGCATGGTAT TTCCAGAAAC GGGAAGGCCT TCAAAAATCT
TGGGACTATG GTGTTGCTGC GATTATTTTG GCTATTCCCG TCTTTTTAAT TGCGCGCCAG
CCCGACTTAG GTACAGCATT ATTAGTTTTT GCCGCCGGTC TTTACGTCAT TATTCTTGCA
GGCTTACCTT GGAAGTGGAT TCTGCCTTTT GTTGGGCTAG GCGTTGTCGG CAACTTGTTG
ATTATTATTT TCGGCAGCAC CATCTGCGCA CATGATGTAG TTTGGCCGTT TGTACACAAT
TACCAAAAGC ACCGCATCTG TACATTGCTT GATCCTACTA GCGATCCGCT GGGCAAAGGC
TTTCATACAA TTCAATCAAT GATTGCAATT GGTTCAGGCG GCTTCTTTGG CAAAGGCTGG
TTCCAAGGCA CTCAAGCGCA TTTGGAATTC ATTCCAGAAA AACATACCGA CTTTGTATTT
GCAGTTTTCT CTGAAGAGTT TGGTCTGTTG GGCAATCTAG TATTGCTAGC ACTCTTCTTT
GCCCTCATTA AAAGAGGTCT CGCAATTTCT GCAAGTGCAC CAAATTTATT TACGCGATTA
TTGGGTGCTG CTGTTACTTT GATTTTCTTT ACTTATGCTT TTGTGAATAT CGGCATGGTG
AGCGGCTTAT TGCCGGTTGT TGGAGTGCCA CTACCATTTA TTAGTTATGG TGGTACTGCG
CTGGTTACCC TAGGTTTTGG CACAGGAATA TTGATGAGCA TTCATCGTCA TCGCCGTTTA
GTGCAAAGCT AA
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| Protein sequence | MEKSPLTKVK KLFFGIFSEL DRQLGLILLS LAAVGFFTFL SASQNTPVQI ADEFRNLVLS
FVVMWIVSRI PPKWLEMGAV WIYGFGIALL IAVAAFGLIK KGARRWLNIG VVIQPSEIMK
IAMPLMLAWY FQKREGLQKS WDYGVAAIIL AIPVFLIARQ PDLGTALLVF AAGLYVIILA
GLPWKWILPF VGLGVVGNLL IIIFGSTICA HDVVWPFVHN YQKHRICTLL DPTSDPLGKG
FHTIQSMIAI GSGGFFGKGW FQGTQAHLEF IPEKHTDFVF AVFSEEFGLL GNLVLLALFF
ALIKRGLAIS ASAPNLFTRL LGAAVTLIFF TYAFVNIGMV SGLLPVVGVP LPFISYGGTA
LVTLGFGTGI LMSIHRHRRL VQS
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