| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1734 |
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| Symbol | |
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| ID | 6184540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1517266 |
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| End bp | 1517940 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672237 |
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| Product | protein of unknown function DUF484 |
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| Protein accession | YP_001798407 |
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| Protein GI | 171464294 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAA TAGACCCAAA ACAAGCCGAG CAAGAAGAGC TGGTTGCCGA GTGGTTACGT
GTAACCCCAG GCTTTTTTGA GCGCTATGCT GATCTCTTTA ATGAAATTCG GATTAAGCAC
CCACATGAGG ATCGCGCCAT CTCATTGCAA GAGCGTCAGA TGACAGTGTT GCGTACACAG
AATCAAGAGC TTAATCGCCG CTTAAGTGAG ATGTTGCACT TTGGTAGTCG TAACGACAAA
ACACAACAAA GTTTGGTTGC TTGGCTATTG CGTTTAATGA AGGCAAACAA TAAAGCCGAT
GTGGAGACTG CAATTACATC TAGCTTGGCT GAAGTTTTTG AAGTGGAGTC AGCGCAATTG
CTTTCACCAA ATTCTGCATT TGGACCTTGG GTCGATACAC CTTTGTGTGG CTCAGCAAAA
GAGCTAGCTG CCGCCAGTGT TGATTTATTG GCTAGCCAAA CTACCATCGA CCCTGAATGG
CAAAGCATGG TCGCTATCGG TTTGCCCCTA GGTAAAAGCA TTGGCATTCA ACAATCCCCC
GCAGTGCTGC TTTTAGCTAG CAAAGACGAA TTACGCTTTA CGGCCGATAT GGGCGCGTTC
TATTTGCGCC AGATTGCCGA ACTCACTGCT GCAGCTTTGG ATCGTATCCA GGCTTATGAA
ACTAAAGGCG ACTGA
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| Protein sequence | MSAIDPKQAE QEELVAEWLR VTPGFFERYA DLFNEIRIKH PHEDRAISLQ ERQMTVLRTQ
NQELNRRLSE MLHFGSRNDK TQQSLVAWLL RLMKANNKAD VETAITSSLA EVFEVESAQL
LSPNSAFGPW VDTPLCGSAK ELAAASVDLL ASQTTIDPEW QSMVAIGLPL GKSIGIQQSP
AVLLLASKDE LRFTADMGAF YLRQIAELTA AALDRIQAYE TKGD
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