| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1733 |
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| Symbol | |
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| ID | 6183565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1516284 |
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| End bp | 1517285 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641672236 |
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| Product | integrase family protein |
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| Protein accession | YP_001798406 |
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| Protein GI | 171464293 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA AGGCGACTGA ACTTCACCCA CTCATGCAGG AGTATTTGCA TGAGCTGCAT
GTGTTGCGTC AACTATCGCC ACATACGCTC AAGGCGTATG GCATGGATTT GAGCGATCTT
CAAAATTTTG CCCTTGAAGA TACTGTTGAA TTATTAAAGG TGAGCAACGG CCATGTGCGT
CGTTGGGCGG GCCGTTTACA TTCCAAAGGC AAATCCCCGA GAAGTATTGC AAGGACACTT
TCTGCATGGC GCGGTTGGTA CGACTGGCTC AGTGAAAAAG ATGCACGGCG CGATGTACAC
GCAGGTAAGG TAACAAGCGC ACTCGTTGCG AACCCCGTCG ATGATGTGAA GGCGCCAAAG
CGCCCGAAGT CATTGCCTAA GGCCTTATCT GTAGAACAGG CGCTTGCCTT AGTAAATCAA
GCGGTCAAAG AGGCTGAAGA GAAAAAAGAC CTAGAGTCGA TTCGGGATGC GGCAATTATT
GGCTTGCTCT ATTCCTCGGG TTTGCGTCTT TCAGAGCTCT TGGGAATTGA TGTGATTCAA
AGTAAAGATC GTCAGCATGA ATCTGCTGGC TGGTTAGATT GGGATGCTGC TGAAGTAACC
GTATTGGGTA AAGGTGGCAA ACGTCGCTCT GTCCCGGTTG GTGTGCCGGC GATGAAATCA
CTTGCTGCAT GGCGAGAGTT GCGCGATGAC GGCAGTTATG CCGAAGAGTC AATCGCATTA
TTTTTATCGG CTACGGGCAA GCGCTTGTCG CCTCGTACCG TGCAGGCGCG CTTACGCACC
CTGGCTATGC GCGCTGGTTT GCCGACACAT GTGCATCCGC ACATGATGAG GCACAGTTTT
GCAAGTCATG TGCTGCAATC GTCCCAAGAT TTGCGCGCTG TTCAGGAGAT GTTGGGGCAC
GCCAGCATCG CCAGTACCCA GATTTACACC TCGCTAGATT CTCAACACCT TGCTCAGGCA
TACGATAAAA CGCATCCACG CGCAAAGGCT GGCAAAGGCT GA
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| Protein sequence | MKLKATELHP LMQEYLHELH VLRQLSPHTL KAYGMDLSDL QNFALEDTVE LLKVSNGHVR
RWAGRLHSKG KSPRSIARTL SAWRGWYDWL SEKDARRDVH AGKVTSALVA NPVDDVKAPK
RPKSLPKALS VEQALALVNQ AVKEAEEKKD LESIRDAAII GLLYSSGLRL SELLGIDVIQ
SKDRQHESAG WLDWDAAEVT VLGKGGKRRS VPVGVPAMKS LAAWRELRDD GSYAEESIAL
FLSATGKRLS PRTVQARLRT LAMRAGLPTH VHPHMMRHSF ASHVLQSSQD LRAVQEMLGH
ASIASTQIYT SLDSQHLAQA YDKTHPRAKA GKG
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