| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1730 |
|---|
| Symbol | |
|---|
| ID | 6183696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 1513652 |
|---|
| End bp | 1514554 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641672233 |
|---|
| Product | acetylglutamate kinase |
|---|
| Protein accession | YP_001798403 |
|---|
| Protein GI | 171464290 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0548] Acetylglutamate kinase |
|---|
| TIGRFAM ID | [TIGR00761] acetylglutamate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGC ATTTACCAAC AATTAGTGAT ATCTCTCCTT TATTAAAGGC GGAGATTTTG
GCTGAGGCTT TGCCTTACAT CCGCTCCTAT CACGGCAAAA CGATCGTGAT TAAGTACGGC
GGAAACGCCA TGGTTGAAGA ACGCCTTAAA GAAAGTTTTG CCCGAGACGT TATCTTGTTG
AAATTGGTTG GCATGAATCC CGTGGTGGTT CATGGCGGCG GCCCTCAAAT TGATGAAGCC
CTGAAGAAGA TTGGCAAGAC CGGAACCTTT ATTCAAGGTA TGCGCGTTAC CGATGAAGAA
ACCATGGAAG TAGTTGAATG GGTTCTCGGC GGCGAAGTGC AGCAAGATAT TGTGATGTTG
ATTAACCACT TTGGCGGCCA GGCTGTGGGC TTGACAGGTA AAGACGGTGG CCTCATTCGG
GCCAAGAAAA TGCTGGTTGC CAATGAAAAG CAGCCGGGTG GCACAATCGA CTTAGGATTT
GTGGGTGAAA TTGAGGCCAT TAATCCTGCG GTTGTTAAAG CCTTGCAAGA TGACGCATTT
ATTCCAGTGA TTTCCCCGAT TGGATTTAGC GAAGAGGGTC AGGCATACAA CATTAATGCT
GACTTGGTTG CTGGCAAGAT GGCTGAAATT CTGCATGCTG AGAAATTAGT CATGATGACG
AATATTCCTG GCGTGATGGA TAAAAACGGC ACTCTCTTAA CCGACCTTAC TGCGCGCGAG
ATCGATGGGC TATTTGCTGA TGGAACGATT TCTGGTGGGA TGTTGCCAAA AATTTCTTCT
GCATTAGATG CAGCAAAGAG CGGTGTTAAT TCAGTGCACA TCATTGATGG CCGTATTGAA
CATTCTTTAT TGTTAGAAAT TCTGACCGAG CAAGCATTCG GTACGATGAT CCGCTCCAGA
TAA
|
|---|
| Protein sequence | MTKHLPTISD ISPLLKAEIL AEALPYIRSY HGKTIVIKYG GNAMVEERLK ESFARDVILL
KLVGMNPVVV HGGGPQIDEA LKKIGKTGTF IQGMRVTDEE TMEVVEWVLG GEVQQDIVML
INHFGGQAVG LTGKDGGLIR AKKMLVANEK QPGGTIDLGF VGEIEAINPA VVKALQDDAF
IPVISPIGFS EEGQAYNINA DLVAGKMAEI LHAEKLVMMT NIPGVMDKNG TLLTDLTARE
IDGLFADGTI SGGMLPKISS ALDAAKSGVN SVHIIDGRIE HSLLLEILTE QAFGTMIRSR
|
|---|
| |