Gene Pnec_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1729 
SymbolslmA 
ID6183221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1512991 
End bp1513641 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content48% 
IMG OID641672232 
Productnucleoid occlusion protein 
Protein accessionYP_001798402 
Protein GI171464289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAAT CTTTAGAGCC AGTAGACATC AACGACAGCA GTGCTGATGC TGGTAAGACA 
CGCAAGCGCC CCAAGCCAGG TGAACGTCGT TTGCAGATTT TGCAAGTGCT CGCTGAGATG 
CTGCAGAACC CGAAGGGCGA GCGTGTAACC ACTGCAGCTT TGGCGGCTAA GATTCAAGCT 
TCAGAGGCAG CTTTGTATCG TCATTTCGCA AGTAAAGCGC AAATGTTCGA AGGCCTTATT 
TCTTTTATCG AGCAAACTGT TTTTGGTTTG ATTAATCAGA TCAACCAAAA GGAAGAATCT 
GGTCTTGCTC AGGCGCGCGG TATTTTGCAA ATGCTCTTGT TCTTTGCAGA AAAGAATCCT 
GGTATGACTC GTGTTTTATT GGGCGATGCC TTATTGCAAG AGGATGATCG CTTACAAGAG 
CGCATTACTC AAGTTCTGGA TCGTGTAGAG GCATCTCTTA AGCAGGCCTT GCGCATTGCT 
CAAACCCAGG GCGGTAATTG GGCGCAACTA GGCCAAGAAG AGGTCAGTAT TCGTGCCGCC 
ATGTTGATGA GTTTTGTATT GGGTCGTTGG CATCGCTTTG CTCGTAGTGG ATTTAAGAAG 
TTGCCGACCG AAGCCTCCGA TGTTAGTTTG CGTCTTCTTC TCTCAGAATG A
 
Protein sequence
MRESLEPVDI NDSSADAGKT RKRPKPGERR LQILQVLAEM LQNPKGERVT TAALAAKIQA 
SEAALYRHFA SKAQMFEGLI SFIEQTVFGL INQINQKEES GLAQARGILQ MLLFFAEKNP 
GMTRVLLGDA LLQEDDRLQE RITQVLDRVE ASLKQALRIA QTQGGNWAQL GQEEVSIRAA 
MLMSFVLGRW HRFARSGFKK LPTEASDVSL RLLLSE