Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1713 |
Symbol | |
ID | 6183664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1498236 |
End bp | 1498925 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641672216 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001798386 |
Protein GI | 171464273 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 89 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCAATT TGGTGGGAGT CCTGCATGAC AAGCCCGCTC AGCCTTATGG AAAAGTATTT AAGGCGGCAC ATGTAGATTT GCCAAAAAAT ATAATTACAG CGATGCAGTT ACATGGCTTA AAGCGCTACT TGCACATGAG CGCGTTGGGA GCAGATTCTA ATGGCCCTTC TATGCATCAG CGTAGTAAAG GTGACGGCGA GGCGGCTGTG AAAGCAAGCA ATTTGGATTG GACCATCTTT AGGCCATCAG TAATTTTTGG CGCACAAGAT CAATTTACTA ATTTATTTTC TAAGTTAACA AAGTTGTTCT CCGCCATACC TTTAGCCAAT CATCAAGCTC AGTTTCAACC TGTGAGCGTG GACGATGTTG CTTCTGCATT TGTGAAATCC TTATCAATGC CCCAAACAAT TTATCAATCT TATGACTTGG TGGGACCAAC GGTTTATACG ATGAAAGAAA TCGTTGAGTT TGCCGCGCGT AGAGCAAAAA CAAGTTGTGC GATTATTCCT ATTCCTGCTT TTGTGGGTTA CTTGCAGGCG CTTGTATTTG AATGCTTGCC AGGCCCAACC TTAATGTCAC GTGACAATAT TGCTTCCATG CAGCTGCCAA ATACCTTGCC TATAAATGGT ATAGATGCGC TTACAGAGGT ATTCAAAATA AGTCGTCGTA GCTTAGGGGG TATGCAGTAA
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Protein sequence | MINLVGVLHD KPAQPYGKVF KAAHVDLPKN IITAMQLHGL KRYLHMSALG ADSNGPSMHQ RSKGDGEAAV KASNLDWTIF RPSVIFGAQD QFTNLFSKLT KLFSAIPLAN HQAQFQPVSV DDVASAFVKS LSMPQTIYQS YDLVGPTVYT MKEIVEFAAR RAKTSCAIIP IPAFVGYLQA LVFECLPGPT LMSRDNIASM QLPNTLPING IDALTEVFKI SRRSLGGMQ
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