| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1710 |
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| Symbol | |
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| ID | 6183461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1495023 |
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| End bp | 1495778 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641672213 |
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| Product | Dehydrogenase-like protein |
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| Protein accession | YP_001798383 |
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| Protein GI | 171464270 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCGT TCATTATGGG CGATCAGGCC AAGAGGTCGA CCAAACCGTT GAAGAAATCT
TGGGGGTTTG GAGTCAAGGC CCAGGCTTTT CAGGCGGATT TGGCTGATGA GGTCTCAACC
AACAATCTTT TTAAAGCCGT TAGCCAAGCA TTTCCGCATT TAAGTTACCT GGTTAACAGT
GCATCCCTCT TTGAATACGA TCGTGCTAAC TCAAAAACCC CGCTAATTGG GAAAAGCTTG
CAAGACCATA TGCAGGTCAA TTTAACGGCG CCGATTTTAT TATCCCAGTT GATGTTTGAA
TATCAAAAAA GTAAATCAAA CACATCAGAG ATCATTCCGT CGGCAATTCA ATTGCTAGAT
CAAAAGCTCA TTAATCCCAA TCCAGACTGT TTGTCTTACA CCTTATCAAA AGCTGCTTTA
CTTTCTTCGG TTGAGTTGTT GGCAATGGAT TTTGCACCCC ATCTACGAGT CATTGGATTG
GCGCCCGGAA TCTCGCTCCC ATCAGGCGAT CAAACGAATG ATAGCTTTTC AAAGGCGCAT
CAAATGACGC CACTAGGAAA GCCTTCAACT CCTTCTGACA TTGCGGGCAG CTGTATTTTT
AGCGGAGTCT GGTGCAATTA CTGGAACCAC CTTGTATGTA GATGGCGGGC AACATTTATT
GTCATCCACT CGCGACGTGA TGTTCAAAAC CAATTAAGTA TTTTTAAAAA AGTAAATATT
CATGCACGCT ATTCTTTCTC ATCCAGCTCT TGTTGA
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| Protein sequence | MLPFIMGDQA KRSTKPLKKS WGFGVKAQAF QADLADEVST NNLFKAVSQA FPHLSYLVNS
ASLFEYDRAN SKTPLIGKSL QDHMQVNLTA PILLSQLMFE YQKSKSNTSE IIPSAIQLLD
QKLINPNPDC LSYTLSKAAL LSSVELLAMD FAPHLRVIGL APGISLPSGD QTNDSFSKAH
QMTPLGKPST PSDIAGSCIF SGVWCNYWNH LVCRWRATFI VIHSRRDVQN QLSIFKKVNI
HARYSFSSSS C
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