| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1706 |
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| Symbol | |
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| ID | 6183681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1490372 |
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| End bp | 1492204 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672209 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
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| Protein accession | YP_001798379 |
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| Protein GI | 171464266 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGTA TTGTTGGCGC AGCCTCCCAT AAGAATATTG TTGATGTGTT GGTTGAGGGC
TTACGCCGCC TAGAGTATCG TGGTTACGAC TCTTGTGGTT TTGCAGTCAT TAATGGTAAT
GATGCTCGGC ACCCGATTGA GCGCGCTCGC ACTACGGCTC GTGTTTCTGA GTTGGCTGAA
CAGGGAAAAG ACTTTGTTGG CACACTCGGT ATTGCACATA CGCGCTGGGC AACTCACGGC
AAGCCAGATA CACAAAATGC TCACCCGCAT ATTTCTAACA GCTTAATTGC AGTTGTTCAT
AACGGCATTA TTGAAAACTA CGAATCACTT CGTGCAGAGT TAAAAACTGC TGGTTATGTA
TTTACCTCTG AAACTGATAC TGAAGTAATT GCTCATTTAG TCCATCAGCA ATATATTGCT
AATGGACAAA AAGATATTGC ACAGTCGGTT AGGGCGGTGC TCCCAAAATT ACATGGCGCC
TATGCTATCG GCGTAATTGC ACAAGATAAC CCAAACACCT TGGTGGGCGC GCGTGTTGGC
TCACCTTTAG TCGTCGCAAT TGGCGATCAG GAACATTTTT TAGCGTCTGA TGCCTTGGCA
TTGGCTGGAC GTGCTCATTC CATGATGTAT TTAGAGGAGG GCGATATTGC CGTTCTCAAG
GCTGATAGTG TTGAAGTGAT TGATCGGGTG AGTAAATATA CTCAGAGAGA ATTAAAGCCT
ATGCCGGCGC AAGCTGACTC GGTTGATTTG GGTCCCTATC AGCACTATAT GCAAAAGGAA
ATTTTTGAGC AGCCTAGAGC AATTGGCGAC ACGCTTGCCA ATATTGCTGA ATTTGGCCCA
GAGCTATTTA ATGCAAATCC TGAGGATTGG AAAGTATTCG ATCAAATTTT GATCTTGGCT
TGCGGTACTA GCTACTACTC TGCATGTGTT GCTAAGTACT GGTTAGAAGA TGTCGCTGGT
ATTCCAACGC AAGTTGAAAT TGCAAGTGAA TATCGCTATC GCACTACAGT TCCAAATCCA
AAGACTTTAA TTGTGGTGGT TTCACAATCT GGCGAAACTG CTGATACCTT GGTTGCCTTA
CGCCATGCTA AGAGCTTGGG TCATAAATAC ACCTTAGCAA TCTGTAACGT AGCAAGCAGC
GCAATGGTTC GCGAAACCGA GTGGAATTTC TTGACTAAGG CTGGCGCAGA AATTGGCGTT
GCCTCGACGA AAGCATTTAC TACTCAGCTG TTGGCGTTAT ATCTCCTTGC AGTCTCATTG
GCAAAGCGTT CCGGCAGAAT TTCTGCTGAA AAAGAGAAAG AATTGCTACG TGAACTACGC
CACCTGCCGA AAGCATTGCA TGCCGTTTTG GCGCTTGAGC CGCAGATTAT TGCTTGGAGT
GACGCTTTTT CTAAATGTGA AAATGCACTC TTCTTGGGTC GTGGCTTACA TTACCCAATT
GCATTGGAAG GCGCTTTAAA GCTCAAAGAA ATTTCTTATA TTCATGCAGA GGCCTATCCT
GCAGGTGAGT TGAAGCATGG ACCGCTTGCC TTGGTAACGG AAAAAATGCC CGTAGTTACG
GTCGCGCCCA ATGATGTTCT TTTGGAAAAG CTTAAACCCA ATATGCAAGA AGTAAAAGCG
CGTGGCGGGA AGCTTTATGT ATTTGCCGAT CAAGATACCC ATATCTCTAG CAGCGATGGC
ATCAATGTAA TTAAGCTACC AGAACACTAC GGCAATCTCT CACCTATTCT TCACGTAGTT
CCACTGCAAT TGCTGGCGTA TCACACAGCA TGTGCACGCG GCACCGATGT CGATAAGCCT
AGAAATCTGG CAAAGAGCGT CACGGTTGAA TAA
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| Protein sequence | MCGIVGAASH KNIVDVLVEG LRRLEYRGYD SCGFAVINGN DARHPIERAR TTARVSELAE
QGKDFVGTLG IAHTRWATHG KPDTQNAHPH ISNSLIAVVH NGIIENYESL RAELKTAGYV
FTSETDTEVI AHLVHQQYIA NGQKDIAQSV RAVLPKLHGA YAIGVIAQDN PNTLVGARVG
SPLVVAIGDQ EHFLASDALA LAGRAHSMMY LEEGDIAVLK ADSVEVIDRV SKYTQRELKP
MPAQADSVDL GPYQHYMQKE IFEQPRAIGD TLANIAEFGP ELFNANPEDW KVFDQILILA
CGTSYYSACV AKYWLEDVAG IPTQVEIASE YRYRTTVPNP KTLIVVVSQS GETADTLVAL
RHAKSLGHKY TLAICNVASS AMVRETEWNF LTKAGAEIGV ASTKAFTTQL LALYLLAVSL
AKRSGRISAE KEKELLRELR HLPKALHAVL ALEPQIIAWS DAFSKCENAL FLGRGLHYPI
ALEGALKLKE ISYIHAEAYP AGELKHGPLA LVTEKMPVVT VAPNDVLLEK LKPNMQEVKA
RGGKLYVFAD QDTHISSSDG INVIKLPEHY GNLSPILHVV PLQLLAYHTA CARGTDVDKP
RNLAKSVTVE
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