Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1706 |
Symbol | |
ID | 6183681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1490372 |
End bp | 1492204 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641672209 |
Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
Protein accession | YP_001798379 |
Protein GI | 171464266 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGGTA TTGTTGGCGC AGCCTCCCAT AAGAATATTG TTGATGTGTT GGTTGAGGGC TTACGCCGCC TAGAGTATCG TGGTTACGAC TCTTGTGGTT TTGCAGTCAT TAATGGTAAT GATGCTCGGC ACCCGATTGA GCGCGCTCGC ACTACGGCTC GTGTTTCTGA GTTGGCTGAA CAGGGAAAAG ACTTTGTTGG CACACTCGGT ATTGCACATA CGCGCTGGGC AACTCACGGC AAGCCAGATA CACAAAATGC TCACCCGCAT ATTTCTAACA GCTTAATTGC AGTTGTTCAT AACGGCATTA TTGAAAACTA CGAATCACTT CGTGCAGAGT TAAAAACTGC TGGTTATGTA TTTACCTCTG AAACTGATAC TGAAGTAATT GCTCATTTAG TCCATCAGCA ATATATTGCT AATGGACAAA AAGATATTGC ACAGTCGGTT AGGGCGGTGC TCCCAAAATT ACATGGCGCC TATGCTATCG GCGTAATTGC ACAAGATAAC CCAAACACCT TGGTGGGCGC GCGTGTTGGC TCACCTTTAG TCGTCGCAAT TGGCGATCAG GAACATTTTT TAGCGTCTGA TGCCTTGGCA TTGGCTGGAC GTGCTCATTC CATGATGTAT TTAGAGGAGG GCGATATTGC CGTTCTCAAG GCTGATAGTG TTGAAGTGAT TGATCGGGTG AGTAAATATA CTCAGAGAGA ATTAAAGCCT ATGCCGGCGC AAGCTGACTC GGTTGATTTG GGTCCCTATC AGCACTATAT GCAAAAGGAA ATTTTTGAGC AGCCTAGAGC AATTGGCGAC ACGCTTGCCA ATATTGCTGA ATTTGGCCCA GAGCTATTTA ATGCAAATCC TGAGGATTGG AAAGTATTCG ATCAAATTTT GATCTTGGCT TGCGGTACTA GCTACTACTC TGCATGTGTT GCTAAGTACT GGTTAGAAGA TGTCGCTGGT ATTCCAACGC AAGTTGAAAT TGCAAGTGAA TATCGCTATC GCACTACAGT TCCAAATCCA AAGACTTTAA TTGTGGTGGT TTCACAATCT GGCGAAACTG CTGATACCTT GGTTGCCTTA CGCCATGCTA AGAGCTTGGG TCATAAATAC ACCTTAGCAA TCTGTAACGT AGCAAGCAGC GCAATGGTTC GCGAAACCGA GTGGAATTTC TTGACTAAGG CTGGCGCAGA AATTGGCGTT GCCTCGACGA AAGCATTTAC TACTCAGCTG TTGGCGTTAT ATCTCCTTGC AGTCTCATTG GCAAAGCGTT CCGGCAGAAT TTCTGCTGAA AAAGAGAAAG AATTGCTACG TGAACTACGC CACCTGCCGA AAGCATTGCA TGCCGTTTTG GCGCTTGAGC CGCAGATTAT TGCTTGGAGT GACGCTTTTT CTAAATGTGA AAATGCACTC TTCTTGGGTC GTGGCTTACA TTACCCAATT GCATTGGAAG GCGCTTTAAA GCTCAAAGAA ATTTCTTATA TTCATGCAGA GGCCTATCCT GCAGGTGAGT TGAAGCATGG ACCGCTTGCC TTGGTAACGG AAAAAATGCC CGTAGTTACG GTCGCGCCCA ATGATGTTCT TTTGGAAAAG CTTAAACCCA ATATGCAAGA AGTAAAAGCG CGTGGCGGGA AGCTTTATGT ATTTGCCGAT CAAGATACCC ATATCTCTAG CAGCGATGGC ATCAATGTAA TTAAGCTACC AGAACACTAC GGCAATCTCT CACCTATTCT TCACGTAGTT CCACTGCAAT TGCTGGCGTA TCACACAGCA TGTGCACGCG GCACCGATGT CGATAAGCCT AGAAATCTGG CAAAGAGCGT CACGGTTGAA TAA
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Protein sequence | MCGIVGAASH KNIVDVLVEG LRRLEYRGYD SCGFAVINGN DARHPIERAR TTARVSELAE QGKDFVGTLG IAHTRWATHG KPDTQNAHPH ISNSLIAVVH NGIIENYESL RAELKTAGYV FTSETDTEVI AHLVHQQYIA NGQKDIAQSV RAVLPKLHGA YAIGVIAQDN PNTLVGARVG SPLVVAIGDQ EHFLASDALA LAGRAHSMMY LEEGDIAVLK ADSVEVIDRV SKYTQRELKP MPAQADSVDL GPYQHYMQKE IFEQPRAIGD TLANIAEFGP ELFNANPEDW KVFDQILILA CGTSYYSACV AKYWLEDVAG IPTQVEIASE YRYRTTVPNP KTLIVVVSQS GETADTLVAL RHAKSLGHKY TLAICNVASS AMVRETEWNF LTKAGAEIGV ASTKAFTTQL LALYLLAVSL AKRSGRISAE KEKELLRELR HLPKALHAVL ALEPQIIAWS DAFSKCENAL FLGRGLHYPI ALEGALKLKE ISYIHAEAYP AGELKHGPLA LVTEKMPVVT VAPNDVLLEK LKPNMQEVKA RGGKLYVFAD QDTHISSSDG INVIKLPEHY GNLSPILHVV PLQLLAYHTA CARGTDVDKP RNLAKSVTVE
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