Gene Pnec_1695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1695 
Symbol 
ID6184597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1482304 
End bp1482804 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content43% 
IMG OID641672204 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_001798374 
Protein GI171464261 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCAT TTACCTCACA AGAGCTGCGC AAAGGTTTTT CCTCATTTGC AACTGGGGTC 
ACTGTTATCA CCTGCCTGGA CGAAGAAGCC AATTCCCATG GCATTACGAT TAGCTCCTTC
AATACTGTCT CATTAGAGCC GCCACTCATC CTCTGGAGCC TGAAGAAACA TTCAAGGCTC
ATGCCTTGGG TTGAGCTTGG CAAGAAGCAT TTGATTCACG TGCTAGAACA TTCGCAAGAA
AACCTAGCAA TACATTTCGC TACCGTCAAA ACCGATCAAT TTAATGGCAT AGGCCATAAA
ATCACAACTA GCGATCTGAC CCAAATTGAT CATTGCGTAG CGTATTACGA ATGCGAAACT
GTATGCGTTC ACATCGGCGG TGATCACAAT ATTATCGTTG CCAAAGTCAT CAACTTAAAA
AATTATCCTG AACGCAAACC TCTTATTTTT GCCCGCAGCA AATTTGTTGG TCTTGATTTC
ACAGATACTA AAACTAGCTA A
 
Protein sequence
MIPFTSQELR KGFSSFATGV TVITCLDEEA NSHGITISSF NTVSLEPPLI LWSLKKHSRL 
MPWVELGKKH LIHVLEHSQE NLAIHFATVK TDQFNGIGHK ITTSDLTQID HCVAYYECET
VCVHIGGDHN IIVAKVINLK NYPERKPLIF ARSKFVGLDF TDTKTS