Gene Pnec_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1690 
Symbol 
ID6183397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1479581 
End bp1480018 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID641672201 
Productconserved hypothetical membrane associated protein 
Protein accessionYP_001798371 
Protein GI171464258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGAA CCATTCCAGA ATTTAATCAA AGCCTAGACA TGTTTAAAAC TATGTGGGGA 
CAAGGCACAG CAGCTCAAGC TGGTCAATTT CCCTTCTCAG CAGATGCTTC TAAGGCTGCT 
GGCAGCTTTG GAGCCGCTTT CCCTGGCTTA GATGTAGATG AGCTAGAAAA ACGTATTAAA 
GACCTTAAAA GCGTTGAAAA CTGGCTTAAT TTGAACCTCA ACATCCTCAA GTCCACCATT 
CAGGAGTTAG AAGTTCAGCA CGCCACCATG ATGGCACTTA AATCCTTTGG CGATGCTGTA 
TCTGCTGCAG GAGCGACCGC AACCACCCCT AAGACTAAAA CGACTAGCGC TAAACCACGG 
AAAACCGCAA TACGCCGTCG TCGCAAAGCT GGCGATGCAA CTTACCTCGA CGAAGTAGGT 
AATTCAGATG AGCAATAG
 
Protein sequence
MFGTIPEFNQ SLDMFKTMWG QGTAAQAGQF PFSADASKAA GSFGAAFPGL DVDELEKRIK 
DLKSVENWLN LNLNILKSTI QELEVQHATM MALKSFGDAV SAAGATATTP KTKTTSAKPR 
KTAIRRRRKA GDATYLDEVG NSDEQ