| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1689 |
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| Symbol | |
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| ID | 6183900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1478442 |
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| End bp | 1479506 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672200 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_001798370 |
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| Protein GI | 171464257 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCTA ATGGTTTTTC CCAGCCTTAC ACCCGTGGTC AAAAGATCCC CGAGCTTTTA
AAGCAGCGCA TTTTGATTTT GGATGGCGCT ATGGGCACCA TGATTCAGCA ATACAAATTA
ACCGAGGCTG ACTACCGTGG TTTACCAGGC GGCACTCGCT TTGCCGATCA TCCTGGTGAT
ATTAAAGGCA ATAACGAACT ACTCGTACTC ACCCAGCCCC AAATTATTAG CAAGATTCAT
GAGCAATACT TAGAGGCGGG TGCGGACATT ATTGAGACTA ATACTTTTGG TGCGACTTCT
ATTGCGCAAG AAGATTACAA GATGGCCAAC TTAGCGCGTG AAATGAATGA AGTCTCTGCT
AGATTGGCGC GCGCTGCTTG CGAAAAGTAC AGCACCTCAG ATAAGCCCCG CTTTGCTGCG
GGCGCAATTG GACCTACACC CAAGACAGCA AGCATCTCTC CTGATGTAAA TGATCCTGGT
GCACGCAATG TGACCTTTGA CGCTTTGCGT GCTTCATACC ATGAGCAGAT AGAAGGTTTG
TTTGCTGGCG GCGTAGATTT ATTTTTAGTT GAAACCATTT TCGATACGCT TAATGCTAAA
GCCGCACTCT TTGCACTTGA TGAATTTTTT GAAGAAACAG GCGAGCGTTT GCCAGTGATG
ATTTCTGGAA CGGTAACGGA TGCATCTGGA CGTATTTTGT CTGGGCAAAC AGTCGAAGCA
TTTTGGAATA GCTTACGCCA TATTAAGCCG CTTACTTTTG GTTTGAACTG TGCACTTGGT
GCTGCCTTGA TGCGCCCTTA CATTGCAGAG TTGGCTCGTA TATGTGATGC CGCTGTGTCA
TGCTATCCCA ATGCTGGCTT GCCTAACCCA ATGAGCGACA CCGGCTTTGA TGAGACTCCT
GAAATTACAT CCAGTCTGGT CGACGGTTTT GCTAAAGACG GCTTAGTTAA TTTGGTTGGT
GGTTGCTGTG GCACAACCCC TGATCACATC CGTGCAATTG CGAATGCGGT TGCGCAGCGC
AAGCCTCGCG CTTTTTATCG CGAGAATGCT GGGGTGTCAG CATGA
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| Protein sequence | MQSNGFSQPY TRGQKIPELL KQRILILDGA MGTMIQQYKL TEADYRGLPG GTRFADHPGD
IKGNNELLVL TQPQIISKIH EQYLEAGADI IETNTFGATS IAQEDYKMAN LAREMNEVSA
RLARAACEKY STSDKPRFAA GAIGPTPKTA SISPDVNDPG ARNVTFDALR ASYHEQIEGL
FAGGVDLFLV ETIFDTLNAK AALFALDEFF EETGERLPVM ISGTVTDASG RILSGQTVEA
FWNSLRHIKP LTFGLNCALG AALMRPYIAE LARICDAAVS CYPNAGLPNP MSDTGFDETP
EITSSLVDGF AKDGLVNLVG GCCGTTPDHI RAIANAVAQR KPRAFYRENA GVSA
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