Gene Pnec_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1686 
SymbolargS 
ID6183368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1473618 
End bp1475345 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content46% 
IMG OID641672197 
Productarginyl-tRNA synthetase 
Protein accessionYP_001798367 
Protein GI171464254 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCTA CTAATAAAAA TCGCTTAATT GAAATGCTGA GCGCTGCACT GACAGGCTTG 
GCTCAGGAGC GCGGCCTAGA GGCTCCCCCT ACACCTCGTT TGGAGCGCCC TAAGGCCGTT
GATCATGGTG ATGTCGCGTG CAATATCGCT CTCCAGCTCT CGAAGGCTTG GAAGCTCAAT
CCGCGGGAAC TAGCTCAAGC TTTGGTAGAG CGCCTGCAGC AGCAAACTGG CTTTAATGAG
TTGATTGCTT CTTGTGAAAT CGCTGGCCCT GGTTTTAGTA ATTTCCGCCT TAGTAATGCC
GCCAAGACTG CGGTAGTGCA GGAAATACTT TCTGGCGGAA CAAGTTTTGG TGAATCCGCT
CCGGCTGATG GTTCTGCAAC AAGCGCCATG ATTGAGTTTG TTTCTGCCAA TCCTACCGGA
CCACTCCATG TTGGCCACGG AAGGCAGGCG GCACTTGGTG ACGCTCTAGC GAATTTATTA
GCAACTCAGG GTATCAAAGT TCATCGCGAG TTCTATTACA ACGATGCCGG TGTACAGATT
GCGAATTTAG CTTTATCAGT TCAGGCACGC TTACAGGGTT TAAAACCTGG TGATGCTAAA
TGGCCTGAGC AGGCCTACAA CGGCGAATAT ATTGCAGAGA TAGCTACTAC ATTTAAAGCC
TCACCAGAAT TTAAAGATGA TATTGAAGCT ATTCGCCAAT TTGCTGTTGC TTATTTGCGC
AATGAACAAG ATATTGATTT AAAAACTTTT GGTGTCAAAT TTGATTGCTA CTACCTCGAG
TCTTCCTTAT ATACCGATGG TAGCGTTGCA CAAATTGTTG GTGATCTGCA AAGTATCGGC
AAGACCTATG AATCTGAAGG CGTGCTGTGG TTAAAGACTA TAGATGACGG TGATGATAAA
GACCGTGTGA TGCGTAAGTC GGACGGTAGT TTTACGTATT TTGTACCTGA TGTCGCGTAT
CACACGAGCA AGTGGAATCG TGGCTTTCAG AAAGTGATTA ATGTGCAGGG TAGCGACCAT
CATGGAACCA TTGCCCGTGT TCGTTCAGGC TTGCAGGGTG TAGCACAAAA GCGCGGTTGG
GATATCCCTA AAACTTATCC CGATTATGTT TTGCATAAGA TGGTTACGGT GATGCGCCAT
GGTGAGGAAG TAAAAATTTC TAAGCGCGCT GGTTCTTATG TAACTGTGCG TGATCTGGTG
GAATGGTCTG GCGGCGTTAC CCCTGAGATG ACTTCCGAAG AAAGAGAATT AGCTTTGCAG
CGTGGTCGTG ATGCTGTGCG CTTTTTCTTA ATCTCACGTA AGGCAGATAC CGAATTTGTT
TTTGATATTG ATTTAGCTCT GCAGCAAAAT GATGAGAATC CAGTGTTCTA TGTTCAGTAT
GCGCATGCAC GAATTAGCTC TATATTGCAG CAATGGGGTG GGCAAACATC GGATTTGGCC
TCTGCCGATT TGTCGCTATT GCAAAGTAAG GCCTCAGATC ATTTGTTGCG CTGTTTAGCA
GAATATCCAG AAATGCTTAC AACTGCCGCC GAAGAGCTAG CGCCTCATGC ATTGGCTTTC
TACCTGCGAA ATCTGGCAGG AGATTTCCAC ACTTTTTACA ACGCTGATCG CGTATTAGTT
GACGATCAAA ATTTAAAGCT AGCCCGCCTT GCGCTGTTGT CTGCGACACG TCAGGTATTG
CAAAATGGCT TAAAAGTACT CGGGGTATCT GCGCCAGCAA AGATGTAA
 
Protein sequence
MLSTNKNRLI EMLSAALTGL AQERGLEAPP TPRLERPKAV DHGDVACNIA LQLSKAWKLN 
PRELAQALVE RLQQQTGFNE LIASCEIAGP GFSNFRLSNA AKTAVVQEIL SGGTSFGESA
PADGSATSAM IEFVSANPTG PLHVGHGRQA ALGDALANLL ATQGIKVHRE FYYNDAGVQI
ANLALSVQAR LQGLKPGDAK WPEQAYNGEY IAEIATTFKA SPEFKDDIEA IRQFAVAYLR
NEQDIDLKTF GVKFDCYYLE SSLYTDGSVA QIVGDLQSIG KTYESEGVLW LKTIDDGDDK
DRVMRKSDGS FTYFVPDVAY HTSKWNRGFQ KVINVQGSDH HGTIARVRSG LQGVAQKRGW
DIPKTYPDYV LHKMVTVMRH GEEVKISKRA GSYVTVRDLV EWSGGVTPEM TSEERELALQ
RGRDAVRFFL ISRKADTEFV FDIDLALQQN DENPVFYVQY AHARISSILQ QWGGQTSDLA
SADLSLLQSK ASDHLLRCLA EYPEMLTTAA EELAPHALAF YLRNLAGDFH TFYNADRVLV
DDQNLKLARL ALLSATRQVL QNGLKVLGVS APAKM