| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1674 |
|---|
| Symbol | |
|---|
| ID | 6183638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 1465351 |
|---|
| End bp | 1466136 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641672189 |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase |
|---|
| Protein accession | YP_001798359 |
|---|
| Protein GI | 171464246 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAA ATTGCATACT TGAGCGCGTT ATCGAGACAA GATCAACAAA CGACGATCTT
TTGGAGCGCT GGCGCGCTGG CCAGTTAATT GACCTCGTGG CGCGTATTGC CCACAAACAA
ACAGCAGGCA AAGGAAGGGC AGGTCGGTCA TGGCTAGCAA ATCCTGAGGA CTCACTTTGC
TTTTCCTTGG CCTTTCCATT CAAAAGAACC CCTGCTGAAC TTAGCGGACT GAGCTTGCTG
GTTGGTTTGG CAGTAATCTC CGGAATTGCT CAAGCATGCA ACCTTAGCGA ATCAGAACTT
CACCAAGCGG GACTGCGACT AAAGTGGCCC AATGATTTGC TGCTGAATGA CGCTAAACTC
GCCGGTATTC TGATTGAAGG TGGCCAAGCA AAAGCAGGAG AGGTCACCTG GATGATTATT
GGCATTGGCA TCAACCTACG CAATACAGAG GCTATAGAAG CAAATCTAGG TAATGGATAT
AAAGCAAGCT CTCTTCATCA GATTACAAAT TCTCTGCCTG ATCTCGAGTA CCTTTGGATG
AAATTGATCG CCTCTCTTGA ACACCATCTC ACAGAATTTG ATCTACAGGG CTTTAAGCCG
TGTAAAGAGT CTTGGATGCA TTGGGATGCT TATCAAGATC AAGCGGTTTG TATTTCTGGT
GCCGGCAAAA ACGCCATGCA TGGAATTACA AAAGGCGTTG ATGAAACTGG AGCCTTATTA
TTGCAACAAG AAAATAGCAT AATCAATATT CATGCAGGCG ATGTTTCATT GCGGGTGCAA
TCATGA
|
|---|
| Protein sequence | MTANCILERV IETRSTNDDL LERWRAGQLI DLVARIAHKQ TAGKGRAGRS WLANPEDSLC
FSLAFPFKRT PAELSGLSLL VGLAVISGIA QACNLSESEL HQAGLRLKWP NDLLLNDAKL
AGILIEGGQA KAGEVTWMII GIGINLRNTE AIEANLGNGY KASSLHQITN SLPDLEYLWM
KLIASLEHHL TEFDLQGFKP CKESWMHWDA YQDQAVCISG AGKNAMHGIT KGVDETGALL
LQQENSIINI HAGDVSLRVQ S
|
|---|
| |