| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1663 |
|---|
| Symbol | |
|---|
| ID | 6183824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 1458962 |
|---|
| End bp | 1459300 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641672178 |
|---|
| Product | nitrogen regulatory protein P-II |
|---|
| Protein accession | YP_001798348 |
|---|
| Protein GI | 171464235 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0347] Nitrogen regulatory protein PII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.824699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 0.572812 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA TTATCGTAAT CATCAAGCCA TTCAAGCTTG ACGAAGTGCG CGAAGCTCTC
TCGGAAGTGG GAGTTTCGGG CATTACCGTC ACTGAAGTTA AAGGCTTTGG TCGTCAAAAG
GGTCACACTG AGTTGTATCG CGGTGCTGAA TATGTTGTTG ACTTTTTACC TAAAGTAAAA
ATTGAAGCTG CTGTTGAAGA TGGCATCTTG GAACGTGCGA TTGAAGCAAT TGAAAAATCT
GCGCGTACAG GCAAAATTGG CGATGGCAAG ATTTTTGTCT CACTAGTTGA GCACGTCATT
CGTATTCGTA CCGGTGAAAC CGGTGCGCCA GCACTTTAA
|
|---|
| Protein sequence | MKLIIVIIKP FKLDEVREAL SEVGVSGITV TEVKGFGRQK GHTELYRGAE YVVDFLPKVK
IEAAVEDGIL ERAIEAIEKS ARTGKIGDGK IFVSLVEHVI RIRTGETGAP AL
|
|---|
| |