| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1654 |
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| Symbol | |
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| ID | 6183662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1450462 |
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| End bp | 1451895 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672172 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001798342 |
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| Protein GI | 171464229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.9351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAAT TTCTAAAGAA TTTTGCATTA ATCGCCGTCG GTCTTATCGC GGGTGTAGCA
GCTACGATTC AACTCTCCGC GACCGCCCAG CAAGGGGCTC AGCTCCCGCT AGATGAACTA
CGCACGCTAT CCAATGTCTT TGCACAAATT AAGCGTGAGT ACGTTGAGCC AATTGAAGAC
AAGCAATTAC TAACAGATGC TGTCAAGGGA ATGGTGAGCA GTCTTGATCC ACACTCTACT
TTTTTAGACA AAAAAGATTT TGCAGAAATG CAAGAAATGA CTTCTGGTAA ATTTGCCGGT
CTCGGAATTG AAATTACTTC TGAAGATGGC GTGGTAAAAG TATTAAATCC AATTGAAGAT
AGTCCTGCTG CACGTGCAGG TCTTCAAGCT GGAGATTTAA TTACACGTCT AGACGACAAA
CCGGTGCGCG ACATGTCTCT CGATAAAGCA GTGCGTACTA TGCGTGGCAC ACCTGGAACC
AAAATTACTT TGACAGTGTT TCGCAAGAGT GAGGAGCGTA GCTATCCAGT AACAATCACG
CGCGCAGAAA TTAAAGTTCA ATCAGTCAAA ACCAAACTTC TCGATAACGA TATTGCCTGG
GTCAGAATCA CTAGCTTTCA GGAGCGCACC GTTCCCGATC TTGCTAAAAA GTTGACCGAT
ATTGCCAATC AAGATCCAAA ACTCAAGGGC ATCATTCTGG ATCTTCGTAA CAATGGTGGC
GGCTTACTTC AAGGGGCTGT AGGGGTTGCA GCCGCCTTTC TACCGGCAGA TGTAGTGATT
GTTTCCACCA AAGGTCAATC CCCCGATTCA AAGCAAGTAT TTAATGCCAC ACCAGCCATG
TATCGTCTAA ATGAGCCTGG CGATCCTCTG GCAGGGGTTC CTGCGATATT TAAGAAGTTA
CCAATGGTGG TCTTGGTTAA TGCCTATTCT GCCTCGGCTT CTGAGATCGT TGCCGGCGCA
CTTCAGGACT ACAAGCGCGC AACTATCATT GGAAAAACGA CCTTTGGTAA AGGCTCAGTT
CAAACCGTTC GCCCCCTAAC CAATGATTCA GCACTCAAAA TCACCACCGC TTATTACTAC
ACCCCAAGTG GTAAGTCGAT TCAAGCCTTT GGCGTTAAAC CCGACATTCC AGTTGATCAA
AATAAAGATG GTGATCCAGA TGATGTATTG ATCACTCGCG AGATTGATAG CGAGAAGCAT
TTGCGCAACA AACAATCCAC TGAAGACAAA CTCATTAAAG ATCGCGAACA GCGCCGCCTA
GAAGAGTTAC AACGCATTGA AGAAAAGAAT GCCAAGAAAA CTCCCGAGGA AAAAGAGAAA
GATAAAAATA AAAAGTCGCC TGAACTCGGT AGTGCAGATG ACTTTATGCT TTCTCAAGCG
GTCGCCTTTA TCAACGGTCA GCCCGTGAAG CGCTCATCAT CAAAACTTGA GTAA
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| Protein sequence | MRQFLKNFAL IAVGLIAGVA ATIQLSATAQ QGAQLPLDEL RTLSNVFAQI KREYVEPIED
KQLLTDAVKG MVSSLDPHST FLDKKDFAEM QEMTSGKFAG LGIEITSEDG VVKVLNPIED
SPAARAGLQA GDLITRLDDK PVRDMSLDKA VRTMRGTPGT KITLTVFRKS EERSYPVTIT
RAEIKVQSVK TKLLDNDIAW VRITSFQERT VPDLAKKLTD IANQDPKLKG IILDLRNNGG
GLLQGAVGVA AAFLPADVVI VSTKGQSPDS KQVFNATPAM YRLNEPGDPL AGVPAIFKKL
PMVVLVNAYS ASASEIVAGA LQDYKRATII GKTTFGKGSV QTVRPLTNDS ALKITTAYYY
TPSGKSIQAF GVKPDIPVDQ NKDGDPDDVL ITREIDSEKH LRNKQSTEDK LIKDREQRRL
EELQRIEEKN AKKTPEEKEK DKNKKSPELG SADDFMLSQA VAFINGQPVK RSSSKLE
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