| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1648 |
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| Symbol | |
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| ID | 6183600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1446968 |
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| End bp | 1447438 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641672166 |
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| Product | RNA methyltransferase, TrmH family, group 2 |
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| Protein accession | YP_001798336 |
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| Protein GI | 171464223 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.158148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.993753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATG TTGTTTTGTT CGAACCAGAA ATTCCGCCCA ATACTGGCAA CATCATCCGC
CTTTGTGCCA ATACAGGTGC AAAGCTGCAT TTAATTGAAC CCCTTGGATT TCCAATGGAA
GATGCAAAAC TGCGCAGAGC TGGTTTGGAT TATCACGAGT TTGCAAGAGT CAAGGTTTAT
AAAAATTGGG CGCAGTTTTT ACAAGACGAG CATCCAAATC CTGAACATCT ATTTGCCCTA
ACCACCAAAG GCTCGGGCAA TTTTCATGAA GGTCAATATT CGCCTAACGA TTACTTTGTA
TTTGGATCAG AGACCAAGGG CATCACAGAT GAAGTAAGGA ACTCCATTCC AGCTCATAAT
CGAATGCGAC TTGCAATGCA AGATAGCAGT CGTAGCTTAA ACCTATCTAA TACGGTGGCT
ATTGTTGTGT ATGAAGCATG GCGCCAAAAC GGCCTTGCGG GCGGTCAATA A
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| Protein sequence | MFNVVLFEPE IPPNTGNIIR LCANTGAKLH LIEPLGFPME DAKLRRAGLD YHEFARVKVY
KNWAQFLQDE HPNPEHLFAL TTKGSGNFHE GQYSPNDYFV FGSETKGITD EVRNSIPAHN
RMRLAMQDSS RSLNLSNTVA IVVYEAWRQN GLAGGQ
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