| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1645 |
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| Symbol | |
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| ID | 6182957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1444057 |
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| End bp | 1445214 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672163 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001798333 |
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| Protein GI | 171464220 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.856042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.904416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTTAT TTGGAAAAGT CACTAGGGCT TTGCTCTATT TCGCAGTAGC TTTTGGCGCT
GCTTTTGCTC ATGCAGCAGA GAATATGCCT GGTGGCCCAG CTGTTAATCA GCTGAATTTC
GCGCCCGCTG CTACCAAAAT CATGCAAGAG ATCCACTGGT TGCATTGGAT GATGTTGGCA
ATTTGCGCGT TGATTTTTGT GGGCGTTTTT GGAGTGATGT TCTATTCCAT CTTGAAGCAC
CGCAAATCAT TAGGTCATAA ATCAGCCTCA TTCCACGAGA GCACCACTGT TGAAATTATT
TGGACAGTTA TTCCATTGCT CATCGTGATT GGTATGGCAT TGCCTGCAAC AAAAACAGTT
GTAGCAATGA AAGACACCAC AAACTCCGAC ATTACTATTA AGACTACTGG TTACCAGTGG
AAGTGGGGTT ACGACTACAT TAAAGGTGAG GGCGAGGGCA TTAGCTTCCT CTCAACGATG
TCTACTTCAC GTGAAGCTAT CAATAACCTC GCGCCAAAAT CAAATACTTA TTTGATGGAA
GTGGATAACG AAATGGTTGT GCCTGTTGGC AAGAAGATTC GTTTGATCAC TACTGCTAAC
GACGTGATTC ATGCTTGGAC TATTCCAGCG TTTGGCGTTA AGCAAGACGC GATTCCAGGT
TTTGTTCGTG ACACTTGGTT TAGAGCTGAA AAGATCGGCA CATTCCGCGG TCAGTGTTCT
GAGCTCTGCG GCGCCGAGCA TGCCTTTATG CCCATCGTTG TGAGAGTGGT TTCTCAAGAG
GACTACAGCA AGTGGGTCGA AGAGGAGAAG AAAGAAATGG GTGCTGGCGG CGATGATCCA
TCTAAGGTTT ACACATTAGA TGAGCAAAAA GAGCGCGGCG CTAAAGTGTA TGCAGCGAAC
TGCGCAGCTT GTCACCAGCC AAACGGAAAA GGTGCGGGCG CATTCCAAGC GTTAGACGGT
AGCAAAGTTG TTTTAGGCCC TAAAGCTGGT CAGTTCAACA TTCTTATTAA TGGTAAGGGC
GCGATGCCGA AGTGGGCTGG TGTGATTTCT GATGGCGATA TCGCTGCGGT CATGACCTAT
ACACGTAACG CATGGGGTAA TAAGACGAGT GAAGTGATTC AGACCCAAGA GATTATTACT
GCACGCGGCG GCAAATAA
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| Protein sequence | MNLFGKVTRA LLYFAVAFGA AFAHAAENMP GGPAVNQLNF APAATKIMQE IHWLHWMMLA
ICALIFVGVF GVMFYSILKH RKSLGHKSAS FHESTTVEII WTVIPLLIVI GMALPATKTV
VAMKDTTNSD ITIKTTGYQW KWGYDYIKGE GEGISFLSTM STSREAINNL APKSNTYLME
VDNEMVVPVG KKIRLITTAN DVIHAWTIPA FGVKQDAIPG FVRDTWFRAE KIGTFRGQCS
ELCGAEHAFM PIVVRVVSQE DYSKWVEEEK KEMGAGGDDP SKVYTLDEQK ERGAKVYAAN
CAACHQPNGK GAGAFQALDG SKVVLGPKAG QFNILINGKG AMPKWAGVIS DGDIAAVMTY
TRNAWGNKTS EVIQTQEIIT ARGGK
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