Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1645 |
Symbol | |
ID | 6182957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1444057 |
End bp | 1445214 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641672163 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_001798333 |
Protein GI | 171464220 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.856042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.904416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTAT TTGGAAAAGT CACTAGGGCT TTGCTCTATT TCGCAGTAGC TTTTGGCGCT GCTTTTGCTC ATGCAGCAGA GAATATGCCT GGTGGCCCAG CTGTTAATCA GCTGAATTTC GCGCCCGCTG CTACCAAAAT CATGCAAGAG ATCCACTGGT TGCATTGGAT GATGTTGGCA ATTTGCGCGT TGATTTTTGT GGGCGTTTTT GGAGTGATGT TCTATTCCAT CTTGAAGCAC CGCAAATCAT TAGGTCATAA ATCAGCCTCA TTCCACGAGA GCACCACTGT TGAAATTATT TGGACAGTTA TTCCATTGCT CATCGTGATT GGTATGGCAT TGCCTGCAAC AAAAACAGTT GTAGCAATGA AAGACACCAC AAACTCCGAC ATTACTATTA AGACTACTGG TTACCAGTGG AAGTGGGGTT ACGACTACAT TAAAGGTGAG GGCGAGGGCA TTAGCTTCCT CTCAACGATG TCTACTTCAC GTGAAGCTAT CAATAACCTC GCGCCAAAAT CAAATACTTA TTTGATGGAA GTGGATAACG AAATGGTTGT GCCTGTTGGC AAGAAGATTC GTTTGATCAC TACTGCTAAC GACGTGATTC ATGCTTGGAC TATTCCAGCG TTTGGCGTTA AGCAAGACGC GATTCCAGGT TTTGTTCGTG ACACTTGGTT TAGAGCTGAA AAGATCGGCA CATTCCGCGG TCAGTGTTCT GAGCTCTGCG GCGCCGAGCA TGCCTTTATG CCCATCGTTG TGAGAGTGGT TTCTCAAGAG GACTACAGCA AGTGGGTCGA AGAGGAGAAG AAAGAAATGG GTGCTGGCGG CGATGATCCA TCTAAGGTTT ACACATTAGA TGAGCAAAAA GAGCGCGGCG CTAAAGTGTA TGCAGCGAAC TGCGCAGCTT GTCACCAGCC AAACGGAAAA GGTGCGGGCG CATTCCAAGC GTTAGACGGT AGCAAAGTTG TTTTAGGCCC TAAAGCTGGT CAGTTCAACA TTCTTATTAA TGGTAAGGGC GCGATGCCGA AGTGGGCTGG TGTGATTTCT GATGGCGATA TCGCTGCGGT CATGACCTAT ACACGTAACG CATGGGGTAA TAAGACGAGT GAAGTGATTC AGACCCAAGA GATTATTACT GCACGCGGCG GCAAATAA
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Protein sequence | MNLFGKVTRA LLYFAVAFGA AFAHAAENMP GGPAVNQLNF APAATKIMQE IHWLHWMMLA ICALIFVGVF GVMFYSILKH RKSLGHKSAS FHESTTVEII WTVIPLLIVI GMALPATKTV VAMKDTTNSD ITIKTTGYQW KWGYDYIKGE GEGISFLSTM STSREAINNL APKSNTYLME VDNEMVVPVG KKIRLITTAN DVIHAWTIPA FGVKQDAIPG FVRDTWFRAE KIGTFRGQCS ELCGAEHAFM PIVVRVVSQE DYSKWVEEEK KEMGAGGDDP SKVYTLDEQK ERGAKVYAAN CAACHQPNGK GAGAFQALDG SKVVLGPKAG QFNILINGKG AMPKWAGVIS DGDIAAVMTY TRNAWGNKTS EVIQTQEIIT ARGGK
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