Gene Pnec_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1640 
Symbol 
ID6183683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1440338 
End bp1440550 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content45% 
IMG OID641672158 
Producthypothetical protein 
Protein accessionYP_001798328 
Protein GI171464215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0343284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.981714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGC TTATTCCGAT TGTCCTACTA ATGATTGTTT TTAGCCTAGG ATCAGCCTTG 
TATTACATGA TGAAAGATAG GGGTAACAGC TCGCGCATGG TTCACTCACT GATGCTGCGT 
ATTGGGCTAT CCATCGCCTT GTTTATCGGC ATTCTCTTGG CACACTACTT TGGCCTGATC 
GAGGCCACTG GAATCAAAGT AGGCACTAAT TAA
 
Protein sequence
MKWLIPIVLL MIVFSLGSAL YYMMKDRGNS SRMVHSLMLR IGLSIALFIG ILLAHYFGLI 
EATGIKVGTN